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scnpilot_solids1_trim150_scaffold_2208_5

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(2769..3017)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 81.0
  • Bit_score: 133
  • Evalue 1.00e-28
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 80.0
  • Bit_score: 134
  • Evalue 8.60e-29
hfq; RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 74.0
  • Bit_score: 126
  • Evalue 4.00e-27

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Taxonomy

alpha proteobacterium U9-1i → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGAGCGAAAAACAACAAAATCTCCAGGACACGTTCCTCAACGCGGTCCGCAAGAGCAAATCAGCCGTGACGATTTTTCTCGTCAACGGCGTCAAGCTTCAGGGAAACATCACTTGGTTCGACAATTTTTGCGTTCTCCTGCGCCGGGATGGGCAGGCGCAACTCGTCTACAAACACGCGATCTCGACAGTCATGCCGCTGGGCCCGATCCAGTTGCAGGACGTGGAAACAGCGGCCGAGGGCGCCTGA
PROTEIN sequence
Length: 83
MSEKQQNLQDTFLNAVRKSKSAVTIFLVNGVKLQGNITWFDNFCVLLRRDGQAQLVYKHAISTVMPLGPIQLQDVETAAEGA*