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scnpilot_solids1_trim150_scaffold_2208

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2208_1
unknown

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3..77
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2208_2
unknown

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comp(97..291)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2208_3
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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549..1397
DNA (849bp) protein (283aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8]
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Citreicella sp. SE45 RepID=D0D2G9_9RHOB rbh
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EEX14940.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
scnpilot_solids1_trim150_scaffold_2208_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1444..2748)
DNA (1305bp) protein (435aa)
GTPase HflX n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZL0_9PROT rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hflX; GTP-binding protein hflX; K03665 GTP-binding protein HflX rbh
scnpilot_solids1_trim150_scaffold_2208_5
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2769..3017)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
scnpilot_solids1_trim150_scaffold_2208_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3107..3982)
DNA (876bp) protein (292aa)
D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000372562B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_solids1_trim150_scaffold_2208_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4023..5435)
DNA (1413bp) protein (471aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV1_PARL1 rbh
Nitrogen regulation protein NtrX {ECO:0000313|EMBL:CDO61073.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
two component sigma-54 specific Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX rbh
scnpilot_solids1_trim150_scaffold_2208_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5404..7677)
DNA (2274bp) protein (758aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] rbh
Multi-sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV2_PARL1 rbh
scnpilot_solids1_trim150_scaffold_2208_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7817..9127)
DNA (1311bp) protein (437aa)
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV3_PARL1
nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family {ECO:0000313|EMBL:ABS64736.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 9 items

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