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scnpilot_solids1_trim150_scaffold_2208_7

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(4023..5435)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 459.0
  • Bit_score: 614
  • Evalue 8.70e-173
  • rbh
Nitrogen regulation protein NtrX {ECO:0000313|EMBL:CDO61073.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 462.0
  • Bit_score: 621
  • Evalue 1.00e-174
two component sigma-54 specific Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 459.0
  • Bit_score: 614
  • Evalue 2.70e-173
  • rbh

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGAGCAAGTACGGGTCGTTGATCGCGCCTGAAATTCTCATCGTGGATGATGAAGACGATATCCGTGATCTGATCGCGGGTATTCTGCACGATGAAGGGTATGAGACCCGTGTCGCATCCGATAGCGACGGCGCGCTTGAAGCCGTACGCCATCGCCGCCCGCGTCTGTTAGTGCTCGACATCTGGCTGCAAGGCAGCAGGCTCGATGGGATACAGGTGCTGGACCAGATCAAGCAGGAACATCCCGATCTGCCTGTGGTGATGATCAGCGGCCATGGCACCATCGAAACCGCGGTCGCCTCGATCAAGAAGGGCGCCTATGACTTTATCGAAAAGCCGTTCAAGTCGGACCGCCTGATCCATGTGGTGGGCCGCGCGCTGGAAGCCGCACGCCTGCGCCGTGAAGTTCAGGAGCTGAAACTGAAGGCCGGCGACGATGCCGAGCTTGTCGGTGTTTCCTCCGCTATCTCGCAAGTCCGCCAGATGGTGGACAAGATTGCCCCCGCCGGCAGCCGCGTGATGATCACCGGCCCGTCCGGTTCCGGCAAGGAGGTGGTGGCGCGTTTGATCCACGCGCGTTCGCGCCGTGCCGGCAATGCCTTTGTCGCCGTCAATTGCGCCAACATGTCTCCCGCCCATATCGAGGCCGAATTGTTCGGCGTTGAACAGGCGGATTCCCCGCGCAAGACTGGGCTGCTGGAACTCGCGCATAACGGCACGCTTTATCTCGACGAGATCGCCGACATGCCGCTCGAAACACAGGGCAAGGTTTTGCGCGTTCTGGTCGATCAGACATTCCTGCGCCTTGGCGGCAACACACGGGTTCAGGTCGATGTGCGGGTGGTTTCGTCCTCCACCCGCGATCTGCATGTCGAAATCGCCAATGGCCGTTTCCGCGAGGATCTTTATCACCGGCTGAATGTGGTGCCGGTGCGTGTGCCGTCGCTGGCGGAACGGCGCGACGACATTCCGCTTCTGGTCTCGCATTTCATGAAGCGGCTCTCGGCCGCTTCCGGTCTTGCCATTCGCGAAATCGGCGACGATGCGATGGCGGTGCTACAGGCCCACAACTGGCCCGGCAATGTGCGCCAGTTGCGCAATATCGTGGAACGACTATTGATCCTTGCCACCGATGATGCGGCCCAGGCGATTTCGGCCGATCTTCTGCCGCCGGATCTGGGCGCCAGCGTGCCCTGGGGCAATGCAGGCAAGGGCGATCTTGTCATCTCGCTGCCCTTGCGCGAAGCGCGGGAGATATTCGAGCGCGACTATCTTCTGGCCCAGATCAATCGCTTTGGCGGCAATATTTCGCGCACGGCCGCCTTCATCGGGATGGAGCGTTCGGCGCTGCACCGCAAGCTGAAATCCCTGGGCGTCGGCCCCAATGGCCGGGATCAGACCTTCAACGCATGA
PROTEIN sequence
Length: 471
MSKYGSLIAPEILIVDDEDDIRDLIAGILHDEGYETRVASDSDGALEAVRHRRPRLLVLDIWLQGSRLDGIQVLDQIKQEHPDLPVVMISGHGTIETAVASIKKGAYDFIEKPFKSDRLIHVVGRALEAARLRREVQELKLKAGDDAELVGVSSAISQVRQMVDKIAPAGSRVMITGPSGSGKEVVARLIHARSRRAGNAFVAVNCANMSPAHIEAELFGVEQADSPRKTGLLELAHNGTLYLDEIADMPLETQGKVLRVLVDQTFLRLGGNTRVQVDVRVVSSSTRDLHVEIANGRFREDLYHRLNVVPVRVPSLAERRDDIPLLVSHFMKRLSAASGLAIREIGDDAMAVLQAHNWPGNVRQLRNIVERLLILATDDAAQAISADLLPPDLGASVPWGNAGKGDLVISLPLREAREIFERDYLLAQINRFGGNISRTAAFIGMERSALHRKLKSLGVGPNGRDQTFNA*