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scnpilot_solids1_trim150_scaffold_2208_9

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(7817..9127)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV3_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 438.0
  • Bit_score: 639
  • Evalue 3.10e-180
nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 438.0
  • Bit_score: 639
  • Evalue 9.70e-181
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family {ECO:0000313|EMBL:ABS64736.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 438.0
  • Bit_score: 639
  • Evalue 4.30e-180

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
GGCGAGGGCAATCTCGTCATCTCCGATGTGGTGCTGCCGGATGAAAACGGCTTCGACCTGATCCCGCGCATCAAGCGCACACGCCCCGATCTGCCGGTGGTGGTGATGAGTGCGCAGAACACGCTTCTCACCGCGATCACGGCGGCGGAGCGTGGTGCCTTTGAATATCTGCCCAAGCCATTCGATCTGCGCGAACTGATCGCGGTGGTGCAGCGCGCACTGGCCGCGCCGCAGACCAAACGCAACAATGGCAGTGCGGCGGAGAACAGCGATGACCGCCTGCCGTTGATCGGGCGTTCGCCCGCGATGCAGGAAATCTACCGCACCATTGCGCGGCTGACGCAGACCGATCTGACCGTGACCATCATGGGGGAATCCGGCACCGGCAAGGAACTGGTGGCCCGCGCCCTGCATGATTACGGCAAGCGCCGCCATGGTCCCTTCGTGGCCGTGAATATGGCCGCCATCCCGAAGGAATTGGTGGAAAGTGAGTTGTTCGGGCATGAGCGCGGCGCCTTTACCGGCGCCACCGCACGCGGTGTCGGCCGCTTTGAACAGGCTGAGGGCGGCACCCTGTTCCTCGACGAAATCGGCGACATGCCGCTCGATGCGCAAACCCGGCTGCTGCGCGTGTTGCAGCAGGGCGAATACACCGCGGTTGGCGGCCGCGTCGCGATCAGGACCGATGTGCGCATTATCGCGGCCACAAACCGCGATCTGCGCCAACTCATTCATCAGGGGCTGTTCCGCGAAGACCTCTATTACCGGCTGAATGTGGTGCCGCTGCGCCTGCCGCCCTTGCGCGAGCGGACGGAGGATATTCCCGATCTCGTCCGCCATTTCCTGCGCAAGGCGGAGGAGGAGGGCCTGCCGGTCAAGAATCTCGATGCCGAAGGCCTTGACCTGATGAAGCATTACCGTTGGCCGGGCAATGTGCGCGAACTGGAAAATCTGGTGCGGCGGCTCGCGGTTTTGCACGCGGGCGAAGATATTCCGGCCAACGTGATTGCCGCCGAATTGCGCGAACCGGCCGTGATGGTGGAAAGCGACGATGCGCCCGGTTCGCTGGCCACGGCGGCGGAGCGTTATCTCGCACAATATTTCCGCTCGCAGGGCGATGGGCTGCCACCACCCGGCCTTTATGATCGCGTGCTGACGGAGGTGGAGCGGCCGCTGATCTCGATCTGCCTTGCCGCCACCCGCGGCAACCAGATCAAGGCGGCGCATCTTCTGGGCCTGAACCGCAACACCCTGCGCAAGAAGATCCGGGACCTTGGTCTGGAAGTGATACGGGGCCTCAAAACCGACTGA
PROTEIN sequence
Length: 437
GEGNLVISDVVLPDENGFDLIPRIKRTRPDLPVVVMSAQNTLLTAITAAERGAFEYLPKPFDLRELIAVVQRALAAPQTKRNNGSAAENSDDRLPLIGRSPAMQEIYRTIARLTQTDLTVTIMGESGTGKELVARALHDYGKRRHGPFVAVNMAAIPKELVESELFGHERGAFTGATARGVGRFEQAEGGTLFLDEIGDMPLDAQTRLLRVLQQGEYTAVGGRVAIRTDVRIIAATNRDLRQLIHQGLFREDLYYRLNVVPLRLPPLRERTEDIPDLVRHFLRKAEEEGLPVKNLDAEGLDLMKHYRWPGNVRELENLVRRLAVLHAGEDIPANVIAAELREPAVMVESDDAPGSLATAAERYLAQYFRSQGDGLPPPGLYDRVLTEVERPLISICLAATRGNQIKAAHLLGLNRNTLRKKIRDLGLEVIRGLKTD*