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scnpilot_solids1_trim150_scaffold_3486_2

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: 215..2398

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 749.0
  • Bit_score: 777
  • Evalue 2.90e-222
  • rbh
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 749.0
  • Bit_score: 777
  • Evalue 1.30e-221
Ribonuclease R n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX04_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 749.0
  • Bit_score: 777
  • Evalue 9.20e-222
  • rbh

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2184
GTGCTCGATGCGCTTGCCAGCAATCCGCACGCCACCAAGCGCGATCTGGCACGCACGCTGGGCGTTATCGGCAATGACCGCATCGCGCTGAAGCGCATTCTGAAAGAGCTGGAAACCGAAGGCGCCATCACCCGCGGCCGCAAACGCAGCTTCGCCAAGTCTGGTGCCCTGCCCGAGGTGCTGGTGCTGGAAATCCGTGGCCGCGATCACGATGGCGAGCTTCTGGCCCGCCCGCAGCGGTGGGAGGGCAATGAAGAACCGCCGCAAATTATCGTGCTGCCGGGGCGCGAGGGCGATGCGCCGGGCGACGGCGACCGCATCCTCGCCCGCATCAGTGAAACCCGAAACGGTTATGAAGCCCGCATCATCAAGCGGCTGGGCGCATCCGCGCACAAGGTTCTGGGCGTGTTTCATCACGGCGAACGCGAAGGCCTGATCGCGCCGATCGATCGCAAAAGCCGGTTGGAATTCGTGGTCGATGCGCGCGACCAGAACGGCGCCAAACCGAACGAACTGGTGCTGGCCGAACCGTTGGCCGGCCGCGCCTATGGTGCCCCGCGCGCCCGCATTGTGGAGCGGCTGGGCAGCATGGATGCGCCCAAGGCGATCAGCCTGATTGCCATTCACGCCCACGGCATTCCGACCGAATTTCCGGCAGACGCGATTGCGCAAGCCGAGCGTGCCCAACCGGCGAGCCCGCAGGGGCGTACCGATCTGCGCCACATCCCGCTTGTCACGATCGACCCCGAAGATGCACGCGATCACGACGATGCGGTGTGGGCAGGCCCGGATGACGATCCGCGCAACGCGGGCGGTCACGTCGCCATCGTGGCGATTGCCGATGTCGGCCACTACGTCACGCCGGGTTCTGCGCTGGACCGTGCTGCCTATGAGCGCGGCAACTCCGTCTATTTCCCCGACCGCGTGGTGCCGATGCTGCCGGAGCGGTTGTCGGCCGGCCTCTGCTCCCTGCAACAAGGGGAGGATCGCACCTGTCTTGCCGTGCGCATGGTGTTCGACCGCCACGGCAACAAGAAGCATCACGAGTTCCTGCGTGGTATCATGCGCAGCGCGGCACGGCTTTCCTACCATCAGGCGCAACGTGCCTTTGACGGCAACCCCGATGACGATTGCCGCGCGATTGCGAAGGAAACGCTGGCGCCCTTATGGGCAGCCTATCAGGCCATGGCCGCCGCACGCGACAAGCGGGAGCCCCTGAACCTCGATCTGCCGGAACGGCGCGTCATCATCGGCGAAGACGGCAAGGTGAAGTCCATCGCCTATCGCGAGCGGCTGGAATCCATGCGCCTGATCGAAGAGTTCATGGTGCAGGCCAATGTCGCCGCGGCTGAAACCCTGGAGAAGGCGCGCGTGCCGCTGATCTTCCGCGTTCATGAACATCCTTCGAAAGAAAAACTGCTGGCGTTCTCCGATTTCCTGCGCACGGTTGATATTCCTTTCGCCAAGGGTCAGGTGGTCAAGCCGGGCACGTTCAACCGCATTCTGGAACGCGCAAAAAACACAACTCACACCGATGTGCTGAACGATGTGGTGCTGCGTACCCAGGCACAGGCCGTCTATTCCCCCGACAATATCGGCCATTTCGGGCTGAACCTGTCACACTATGCGCACTTCACCTCGCCCATCCGGCGCTATGCCGACCTCATTGTGCATCGCGCCCTGATCCGCGCCTTCAAATTCGGCGACGATGGCCTCAGCGATAGCGACATCGGCCGCCTGCGTGAAACCGCCGACCACATTTCGGTCTGCGAACGGCGCGCGATGGCGGCGGAACGTGATTCCACCGACCGTTATGTCGCCGCCTATATGGAAGCACGCGTCGGCAACAGTTTCGATGTGCGCGTGACCGGCGTGACACGCTTCGGGCTGTTCGTGCGTATTCCCGAAACCGGTGCGGAAGGGCTGATCCCGGTTCGCACACTCGGCACGGAATTCTTCCGCCACGATGAGCGCCGCCACGCCCTGATTGGCGAACGCAGCGGCACCAAATACGGCCTTGGCGACATTCTGCATGTCCGCCTGGTGGAAGCGGCCCCGCTCACCGGCGGCTTGCGTTTCGACCTTGCCGAAACGGCACAGGACCGCCGCCCGCGCAAGACCACCCCCGGCAAACCGGTGCGCCAGGAAAAATTCCGGCAGAAACGCGGCAAAGCCAAGCGTTGA
PROTEIN sequence
Length: 728
VLDALASNPHATKRDLARTLGVIGNDRIALKRILKELETEGAITRGRKRSFAKSGALPEVLVLEIRGRDHDGELLARPQRWEGNEEPPQIIVLPGREGDAPGDGDRILARISETRNGYEARIIKRLGASAHKVLGVFHHGEREGLIAPIDRKSRLEFVVDARDQNGAKPNELVLAEPLAGRAYGAPRARIVERLGSMDAPKAISLIAIHAHGIPTEFPADAIAQAERAQPASPQGRTDLRHIPLVTIDPEDARDHDDAVWAGPDDDPRNAGGHVAIVAIADVGHYVTPGSALDRAAYERGNSVYFPDRVVPMLPERLSAGLCSLQQGEDRTCLAVRMVFDRHGNKKHHEFLRGIMRSAARLSYHQAQRAFDGNPDDDCRAIAKETLAPLWAAYQAMAAARDKREPLNLDLPERRVIIGEDGKVKSIAYRERLESMRLIEEFMVQANVAAAETLEKARVPLIFRVHEHPSKEKLLAFSDFLRTVDIPFAKGQVVKPGTFNRILERAKNTTHTDVLNDVVLRTQAQAVYSPDNIGHFGLNLSHYAHFTSPIRRYADLIVHRALIRAFKFGDDGLSDSDIGRLRETADHISVCERRAMAAERDSTDRYVAAYMEARVGNSFDVRVTGVTRFGLFVRIPETGAEGLIPVRTLGTEFFRHDERRHALIGERSGTKYGLGDILHVRLVEAAPLTGGLRFDLAETAQDRRPRKTTPGKPVRQEKFRQKRGKAKR*