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scnpilot_solids1_trim150_scaffold_3486

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3486_1
unknown

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comp(3..113)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3486_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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215..2398
DNA (2184bp) protein (728aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] rbh
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Ribonuclease R n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX04_PARL1 rbh
scnpilot_solids1_trim150_scaffold_3486_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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2447..3157
DNA (711bp) protein (237aa)
NUDIX hydrolase n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15SJ8_PSEA6
NUDIX hydrolase {ECO:0000313|EMBL:GAK46803.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
NUDIX hydrolase
scnpilot_solids1_trim150_scaffold_3486_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3154..4299
DNA (1146bp) protein (382aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWZ9_PARL1 rbh
major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS64432.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_3486_5
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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4362..4529
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A900D0
50S ribosomal protein L33
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_solids1_trim150_scaffold_3486_6

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comp(4530..5444)
DNA (915bp) protein (305aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=G3C5S9_9BACT
Lipase/esterase {ECO:0000313|EMBL:ADM63077.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha/beta hydrolase fold protein
scnpilot_solids1_trim150_scaffold_3486_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5476..6375)
DNA (900bp) protein (300aa)
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:CDO59200.1}; EC=3.1.1.24 {ECO:0000313|EMBL:CDO59200.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Lipase/esterase n=1 Tax=uncultured bacterium RepID=G3C5T0_9BACT
alpha/beta hydrolase fold protein rbh
Displaying 7 items

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