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scnpilot_solids1_trim150_scaffold_2305_6

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(5892..6458)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3GYQ0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 190.0
  • Bit_score: 176
  • Evalue 3.20e-41
Uncharacterized protein {ECO:0000313|EMBL:EJM79117.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 190.0
  • Bit_score: 176
  • Evalue 4.50e-41
peptidoglycan-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 183.0
  • Bit_score: 148
  • Evalue 2.20e-33

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Taxonomy

Pseudomonas sp. GM55 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGAAGATTGTATGCTCAGTGGCCCCGAATGGTGCGGCCGCTTTCCCGGCAGCGCGTCTGTGGATGATTTGCTGCCGGACTTTGCGGGGCGGGTGCGGGCCTTTCTCGCCGCATTGAAGGCGGGTGGCGCGCGGGTGCGGATCGCGGCCACCTTCCGCCCGCCGGAGCGTGCGTTCCTGATGCACTGGGCCTGGCAGGTTGCCCATGCCGGGCAGGACCCTGCCGCCATCCCGCGGCGCAAAACCATTCCCATCGCATGGCTGCACCGCGATGCGAAAGGTAGGGCGGACATCGTCGCCTCGCGCGCCGCGGCCGCCGCCATGGTGCGCCGTTACGGCATCCGTTATGCGCCCGCACTCACCAGTCGTCACACCCAGCGCCGCGCTATCGATATGGCCGTCGGCTGGACCGGCATACTCACCCTGCGGGATGCGGCAGGTCAGTTCCGGCCTATCGCGACCGGCCCCCGCACCGGTTCAAATCCTGCACTGATCGAGATTGGTGCGGGTTATGGCGTGCGCAAGCTGGTCCGCGATCCGCCGCACTGGTCGGATGATGGGCATTGA
PROTEIN sequence
Length: 189
MEDCMLSGPEWCGRFPGSASVDDLLPDFAGRVRAFLAALKAGGARVRIAATFRPPERAFLMHWAWQVAHAGQDPAAIPRRKTIPIAWLHRDAKGRADIVASRAAAAAMVRRYGIRYAPALTSRHTQRRAIDMAVGWTGILTLRDAAGQFRPIATGPRTGSNPALIEIGAGYGVRKLVRDPPHWSDDGH*