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scnpilot_solids1_trim150_scaffold_2305

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2305_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..289
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A2C42
Peptidase S41 {ECO:0000313|EMBL:EMS95596.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
peptidase S41
scnpilot_solids1_trim150_scaffold_2305_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(290..2314)
DNA (2025bp) protein (675aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
Carbamoyl-phosphate synthase L chain ATP-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWU7_PARL1
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ABS64380.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_2305_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2397..3656)
DNA (1260bp) protein (420aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI00038068BB rbh
hypothetical protein rbh
Uncharacterized protein aq_1828 {ECO:0000313|EMBL:CCE96101.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
scnpilot_solids1_trim150_scaffold_2305_4
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3723..5426)
DNA (1704bp) protein (568aa)
M28 family peptidase (EC:3.4.-.-); K01423 [EC:3.4.-.-] rbh
Peptidase, family M28 n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C0F6_HYPNA rbh
Peptidase M28 {ECO:0000313|EMBL:KJS26519.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
scnpilot_solids1_trim150_scaffold_2305_5
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

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5492..5884
DNA (393bp) protein (131aa)
PREDICTED: ribonuclease UK114-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12071
putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AFY56903.1}; Flags: Precursor;; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
scnpilot_solids1_trim150_scaffold_2305_6
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5892..6458)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3GYQ0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM79117.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
peptidoglycan-binding domain-containing protein
scnpilot_solids1_trim150_scaffold_2305_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6595..7788)
DNA (1194bp) protein (398aa)
K+ channel, voltage-gated ion channel (VIC) family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1A9_ACIC5
K+ channel, voltage-gated ion channel (VIC) family; K10716 voltage-gated potassium channel
K+ channel, voltage-gated ion channel (VIC) family {ECO:0000313|EMBL:ACO31904.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
scnpilot_solids1_trim150_scaffold_2305_8
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8111..8551)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GTA1_CUPNN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI79939.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
scnpilot_solids1_trim150_scaffold_2305_9
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8697..8801)
DNA (105bp) protein (35aa)
Propionyl-CoA carboxylase beta chain,mitochondrial {ECO:0000313|EMBL:CCV06791.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CCV06791.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Propionyl-CoA carboxylase beta chain,mitochondrial n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F4J8_9RHIZ
Displaying 9 items

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