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scnpilot_solids1_trim150_scaffold_3710_5

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: 4207..5031

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 283.0
  • Bit_score: 337
  • Evalue 1.30e-89
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 283.0
  • Bit_score: 331
  • Evalue 2.10e-88
  • rbh
Formamidopyrimidine-DNA glycosylase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1Q9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 283.0
  • Bit_score: 332
  • Evalue 5.10e-88
  • rbh

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Taxonomy

Wenxinia marina → Wenxinia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCCGAATTGCCTGAGGTCGAAACCGTCCGGCAGGGCCTCCTTCCTGCCATGGAAGGCCACCGGTTTACCAAGGTCGTCACCCGCCGCGGCGATTTGCGCCGCCCTTTTCCAAAAGATTTCGCCACCCGGCTGACCGGCCGCCGGGTCCTGCGCCTCGCCCGCCGGGCCAAATATATCCTGGCCGAACTGGACAATGGGGAGGACCTGGTCATCCACCTCGGCATGAGCGGGCGGATGAGCGTGTCGGCCGGCGCAGACGGCGCCCCCGGCAAGCACGACCATGTGGTGATGGAGACCGACGCGCCCGCCCGCATCATCTTCACCGACCATCGCCGCTTCGGGCTGATGACGTTGCTGCCGCATGATGGTCTCGACAGCGATCCCCTGTTCAAGGGCCTGGGGCCGGAGCCGTTGTCGCCCGCCTTCGATGCCGCCTTTCTGAAAAAAGCGCTGGCGGGCAAACGCACGCCGATCAAATCCGCCCTGCTCGATCAACGCCTGATTGCGGGCCTCGGCAACATCTATGTCTGTGAGGCGCTCTACCGCGCCGGCATCTCACCCAAAAAACTTGCCGGTTCGGTCAGCGCGAAAGCGATCACCCCGCTCGCCCGCGCCATCAAGGCGGTGCTGGAAGATGCAATCAAGGCCGGCGGCTCCTCACTGCGCGATCATAAACAGGTCAATGGCGAACTCGGCTATTTTCAGCATCGCTTCCGGGTCTATGACCGCGAAGGCACGCCCTGCCCGCGCTGCAAAACCCCGATCAAGCGCATCGTGCAGGCCGGCCGCTCCAGCTTCTATTGCCCGAAATGTCAGAGATAG
PROTEIN sequence
Length: 275
MPELPEVETVRQGLLPAMEGHRFTKVVTRRGDLRRPFPKDFATRLTGRRVLRLARRAKYILAELDNGEDLVIHLGMSGRMSVSAGADGAPGKHDHVVMETDAPARIIFTDHRRFGLMTLLPHDGLDSDPLFKGLGPEPLSPAFDAAFLKKALAGKRTPIKSALLDQRLIAGLGNIYVCEALYRAGISPKKLAGSVSAKAITPLARAIKAVLEDAIKAGGSSLRDHKQVNGELGYFQHRFRVYDREGTPCPRCKTPIKRIVQAGRSSFYCPKCQR*