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scnpilot_solids1_trim150_scaffold_3710

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3710_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1147
DNA (1146bp) protein (382aa)
MATE efflux family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J2_9BRAD
MATE efflux family protein {ECO:0000313|EMBL:EFI51202.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
scnpilot_solids1_trim150_scaffold_3710_2
unknown

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1241..1669
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3710_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1853..3415)
DNA (1563bp) protein (521aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
2-polyprenylphenol 6-hydroxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZC2_PARL1 rbh
2-polyprenylphenol 6-hydroxylase; K03688 ubiquinone biosynthesis protein rbh
scnpilot_solids1_trim150_scaffold_3710_4
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3415..4176)
DNA (762bp) protein (254aa)
2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] rbh
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=2 Tax=Rhodospirillum rubrum RepID=Q2RMQ3_RHORT rbh
scnpilot_solids1_trim150_scaffold_3710_5
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4207..5031
DNA (825bp) protein (275aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] rbh
Formamidopyrimidine-DNA glycosylase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1Q9_9RHOB rbh
scnpilot_solids1_trim150_scaffold_3710_6
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(5022..5432)
DNA (411bp) protein (137aa)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CCG04910.1}; EC=2.1.1.64 {ECO:0000313|EMBL:CCG04910.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RK54_BLASD
3-demethylubiquinone-9 3-methyltransferase
scnpilot_solids1_trim150_scaffold_3710_7

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5540..6061
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HB67_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKN77386.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 7 items

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