ggKbase home page

scnpilot_solids1_trim150_scaffold_4170_1

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: comp(28..1338)

Top 3 Functional Annotations

Value Algorithm Source
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 446.0
  • Bit_score: 584
  • Evalue 9.70e-164
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 454.0
  • Bit_score: 570
  • Evalue 5.50e-160
  • rbh
cysteinyl-tRNA synthetase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000362596F similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 448.0
  • Bit_score: 597
  • Evalue 1.00e-167
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
GTGAGCCTCCGCCTCTACAACACGCTGACGCGCACGAAAGAAGATTTCGCGCCCTTGGACCCGAAAAATGTGCGGATGTATGTCTGCGGGCCCACGGTTTACGACTACGCCCATATCGGCAATGCGCGGCCGGCCATCGTGTTCGATGTGCTGTTCCGGCTCCTGCGCCATCTCTATGGGGCGGGGCACGTCACTTACGTCCGCAACATCACGGACGTGGATGACAAGATCAATGCGCGTGCCGCCGAACGTGGCATCTCGATCCGCGAACTGACGGAGGAGACCTGGCGCATCTACAACGACGATGTCTCGGCACTTGGCTGCCTGCCGCCGAGCGTGACACCCCGCGCCACCGAACACATCCCGGAAATGATCGCGATGATCGAAACGCTGATCGAAAAGGAGCATGCCTATGCGGCGGAGGGGCATGTGCTGTTCGATGTTTCGTCCAAGGCGGATTACGGCAAGCTCGCGCGGCGCTCGCTGGATGACATGATCGCCGGTGCCCGTGTCGATGTCGCGCCCTACAAGAAAGGCGCGATGGATTTCGTGCTGTGGAAGCCGTCGGAGACGGGCACACCGGGTTGGGACAGCCCGTGGGGCCGTGGCCGCCCCGGCTGGCATATCGAATGTTCCGCCATGGCCGGAAAATATCTGGGCGAAACCTTCGACATTCACGGCGGCGGAATCGACCTTGTCTTCCCGCATCATGAAAACGAAGTCGCGCAAAGCGAATGCGCCCATCATGGCCACCCGCTCGCCCGCGTCTGGATGCACAATGGTTTTCTGAATGTCGAAGGCGAGAAGATGTCCAAAAGCCTGGGCAATTTCGTCACCATCCACGAACTGCTGGCGGATTGGCCGGGTGACGTGCTGCGCTTCAACATGCTGCGCAGCCATTACCGCCAGCCATTGGACTGGACGTTGGGCGGCATGAAGGAAAGCTGGAACACGCTGGAACATTGGTACGGCACGGTGCCGCCCGGTGCGAACGGGACTCCATCTGCCGCGTTTCTGTCCGCGCTGGGTGATGATCTCAACACACCGCAGGCCATTGCGGAATTGCATCGCGCCACGCCGGGCGATCTTGCGGGCGGTCTGTATCTGCTCGGCTTCAGTGTGCGTGCCGAAGCGCTGGCCAGCAAAGAAGCCGTTGATGAAGCCGCGATTGCTGCCGCCATCACAGCTCGCAACGAAGCCCGCAAGGCAAAGAATTTCGCTGAAGCCGATCGCATCCGTGACGAACTTCTCAAACAGAACATCATTCTAAAAGACGGGCCGGACGGTACGACCTGGGAGATAAAGCGGTGA
PROTEIN sequence
Length: 437
VSLRLYNTLTRTKEDFAPLDPKNVRMYVCGPTVYDYAHIGNARPAIVFDVLFRLLRHLYGAGHVTYVRNITDVDDKINARAAERGISIRELTEETWRIYNDDVSALGCLPPSVTPRATEHIPEMIAMIETLIEKEHAYAAEGHVLFDVSSKADYGKLARRSLDDMIAGARVDVAPYKKGAMDFVLWKPSETGTPGWDSPWGRGRPGWHIECSAMAGKYLGETFDIHGGGIDLVFPHHENEVAQSECAHHGHPLARVWMHNGFLNVEGEKMSKSLGNFVTIHELLADWPGDVLRFNMLRSHYRQPLDWTLGGMKESWNTLEHWYGTVPPGANGTPSAAFLSALGDDLNTPQAIAELHRATPGDLAGGLYLLGFSVRAEALASKEAVDEAAIAAAITARNEARKAKNFAEADRIRDELLKQNIILKDGPDGTTWEIKR*