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scnpilot_solids1_trim150_scaffold_4170

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4170_1
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28..1338)
DNA (1311bp) protein (437aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
cysteinyl-tRNA synthetase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000362596F rbh
scnpilot_solids1_trim150_scaffold_4170_2
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1689..2897)
DNA (1209bp) protein (403aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZFF1_9CAUL
scnpilot_solids1_trim150_scaffold_4170_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3108..4775)
DNA (1668bp) protein (556aa)
NAD+ synthetase; K01916 NAD+ synthase [EC:6.3.1.5] rbh
NAD+ synthetase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS41_PARL1 rbh
NAD+ synthetase {ECO:0000313|EMBL:GAK45841.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
scnpilot_solids1_trim150_scaffold_4170_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4824..5756)
DNA (933bp) protein (311aa)
Oxidoreductase domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1S1_CAUSK
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:CDO60762.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
oxidoreductase domain-containing protein
scnpilot_solids1_trim150_scaffold_4170_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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5934..6959
DNA (1026bp) protein (342aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS36_PARL1 rbh
Putative oxidoreductase YncB {ECO:0000313|EMBL:CDO60760.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
alcohol dehydrogenase; K07119 rbh
scnpilot_solids1_trim150_scaffold_4170_6
unknown

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comp(6975..7220)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 6 items

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