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scnpilot_solids1_trim150_scaffold_1526_4

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4452..4823

Top 3 Functional Annotations

Value Algorithm Source
ribosome-binding factor A n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00035F9C8F similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 121.0
  • Bit_score: 186
  • Evalue 1.20e-44
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 114.0
  • Bit_score: 195
  • Evalue 6.10e-47
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 129.0
  • Bit_score: 182
  • Evalue 9.20e-44

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGGCGCAGAAATCCTTCCATCGCACCGACCGTGTCTCAGCCCAGCTCCGTCGTGAGCTGGGCACGCTGGTGCACGCCGCCGTGCGCGAGCACGGTCTGGCCTCGTCCAGCGTGTCCGACGTCGAAGTGACGCGCGACATGGCGCACGCCAAGGTGTTCGTAACGGTGCTGCAGGCTGACCGGGCGGCGGCGACGGTCAAGGCGCTGAAGGCGCTGGCCCCGGAGATCCGCTACCAGCTGGCGCGTGCGGTGAAGATGCGGCACGTGCCGGAGCTGCATTTCCACTACGACGAATCGGTGGATCGCGGCGAACGCATCGACAACCTGCTGCGCGACCTGCCCGATCTGCACGGCAGTGGCGACGCCGAATAA
PROTEIN sequence
Length: 124
MAQKSFHRTDRVSAQLRRELGTLVHAAVREHGLASSSVSDVEVTRDMAHAKVFVTVLQADRAAATVKALKALAPEIRYQLARAVKMRHVPELHFHYDESVDRGERIDNLLRDLPDLHGSGDAE*