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scnpilot_solids1_trim150_scaffold_1526_5

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_69_8

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4807..5823

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonen similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 308.0
  • Bit_score: 461
  • Evalue 1.20e-126
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 317.0
  • Bit_score: 413
  • Evalue 5.10e-113
  • rbh
tRNA pseudouridine synthase B n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UP63_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 317.0
  • Bit_score: 413
  • Evalue 1.60e-112
  • rbh

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGGCGACGCCGAATAACCCGCGCGAGCGCCGTCCGCGCACCGTGTTCCGCCGCCTGGACGGCATCCTGCTGCTGGACAAGCCGCAGGGCCTGTCGTCCAACCAGGCCCTGCAGCGCGTGCGCCACCTGTTCCGCGCCGAGAAGGGCGGCCACACCGGCAGCCTGGACCCGCTGGCCACAGGGCTGTTGCCGGTCTGCTTCGGCGAGGCGACGAAGATCGCGGGCGGATTGCTGGGTGCGCGCAAGGCGTACGAAACCATTGCCCGGCTGGGCGTGGTCACCGATACCGACGATGCCGATGGCCAGGTGCTGCGCGAGCGCCCGGTGCCGCCGCTCACCATCGACGCCATCGACGCGGCGCTGCGGACCTTCACCGGGCGCATCCAGCAGCGGCCGCCGATCTATTCGGCGCTCAAGCGCGGCGGCGAGCCGCTCTACGCCAAGGCCAGACGCGGCGAGGTGATCGAGGTGGAGCCGCGCGAGGTCGACGTCCACGCCTTTGACCTGCTCAATGCCGCCGATCTGCTGGATGGCCAGCTGGAGAATGGCGCCTCGCCCAACCTGCGGCTGCATGTGGAATGCGGTTCCGGCACCTATGTGCGCAGCCTGGTGCGCGACCTCGGCGAACTGCTGGGCTGCGGTGCCCACGTGGCGCAGCTGCGCCGGCTGTGGGTGGATCCGTTCCGCGAGCCGCGGATGTGGACGCTGGCGGCACTGGAGGAACTGCGCGAGCAGGCCGGGGAGCGCCTGCTCGATGCATGCCTGCTGCCGGTCGAGGCCGGCATGGCTTCGTGGCCGGAAGTGCGGGTCAACGCGGCACAGGCGCAGCGGCTGGGCCGCGGGCAGGGCCTGCGCGGCCCGTATCCGCCGCGCGGCCGGCAGGTGGCAATCCTGGACGAGCAGGGGCGAGGGCTGGGCCTTGGCGACGTCGACGCCGAGGGCGGGCTCCACCCGGCCCGGCTGTTCCGCTGGGCCGCCGAGGCCGCAGGGCAGGTCGACGCGCCGCATTGCCCGTGA
PROTEIN sequence
Length: 339
VATPNNPRERRPRTVFRRLDGILLLDKPQGLSSNQALQRVRHLFRAEKGGHTGSLDPLATGLLPVCFGEATKIAGGLLGARKAYETIARLGVVTDTDDADGQVLRERPVPPLTIDAIDAALRTFTGRIQQRPPIYSALKRGGEPLYAKARRGEVIEVEPREVDVHAFDLLNAADLLDGQLENGASPNLRLHVECGSGTYVRSLVRDLGELLGCGAHVAQLRRLWVDPFREPRMWTLAALEELREQAGERLLDACLLPVEAGMASWPEVRVNAAQAQRLGRGQGLRGPYPPRGRQVAILDEQGRGLGLGDVDAEGGLHPARLFRWAAEAAGQVDAPHCP*