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scnpilot_solids1_trim150_scaffold_2733_6

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3396..4829

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 478.0
  • Bit_score: 843
  • Evalue 3.70e-242
  • rbh
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037510B5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 477.0
  • Bit_score: 908
  • Evalue 3.90e-261
  • rbh
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 478.0
  • Bit_score: 882
  • Evalue 3.20e-253

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAACACAGCCTTCAACTCAAGCTCGGCCAGCACCTTGCCCTGACGCCACAATTGCAGCAGTCGATCCGGCTGCTGCAGTTGTCGACGCTGGAATTGAATCAGGAGCTGGAGCAGATGCTGCAGGACAACCCGCTGCTGGAACGCGAGGACGAAGACGAAGCCGGTTACGCCGCTGCCGACGCACCGGCGCATACCGCCGAAGCCGAAGCGCAAAGCACGGAAACGCCAGCACCGGAAAACGTCGAATCCGAACCGGCCACCGCACTGGACGATGCCGACTGGAACGACTACAGCACCGCGAGCGGCGACGACGAAGACAACGACTATGCGCACGGCTCGGTTTCGGGCGCGACCTTGCGCGAACATCTGCTGAACCAGCTGATCGTCAGTCCGCTCACCCTGCGCGACCGCACCCTGGTCGCCGCGCTGATCGACGACCTCGACGAAGCCGGTTTCCTCACCCAGCCGCTGGCGGACATCATCGCCAGCCTGCAGGCCGAACTCGAGGAACTCGAACCCGAAGAAGTCGAGACCGCGCTCAAGCATCTACAAAACATGGACCCGACCGGAGTCGGCGCACGCAATCTGGCCGAATGCCTGACCCTGCAACTGCGCACCCTGCCGCCCGACACCCCGGCGCGCGATGCGGCCATGCGGCTGACCACGCATTACCTCGATCTGCTGGCCGCGCGCGATGTCGGCAAGCTGAAAAAGATGCTCGGCATCGACGACCTCACGCTGCGCGCCGCCCGCTCCCTGATTCTTTCGCTCAACCCGCGGCCGGGCGCGGCCTTCGGCGCCGACGAAACGCACTACGTCATCCCGGACGTGTATGTGCGCAAGGTCAAGGGCATGTGGATCGCCAGCCTCAACGCCGACGCCATGCCCAAGCTGCGCGTCAACCGCGTCTATGCCGACATCCTGGCGCGCCATCGCGAGTCCGGCGGCAGCCAGCTGGCCAGCCAGCTGCAGGAGGCGCGCTGGCTGATCAAGAACGTGCAGCAGCGCTTCGACACCATCCTGCGCGTTTCGCAGGCCATCGTCGACCGCCAGAAGCACTTCTTCGAGCACGGCGAGGTGGCGATGCGGCCGCTGGTGCTGCGCGAAATCGCCGACGTGGTGGAGCTGCACGAATCGACCATTTCGCGCGTCACCACGCAAAAATTCATGATGACGCCACGCGGGCTGTACGAGTTGAAGTATTTCTTCGGCAGCCACGTCGCCACCGATAGCGGCGGCGCCTGCTCGTCGACCGCCATTCGCGCACTCATCAAACAACTGATCGCCGCCGAAAGCGGCAAGAAACCGCTGTCCGACGGCCAGCTGGCCGAGGTGCTCGGTCAGCAGGGCATCGTGGTGGCCCGCCGCACGGTCGCCAAATACCGCGAATCGCTGCAGATCCCTCCCGCCAACATGCGCCGCGCGCTTTGA
PROTEIN sequence
Length: 478
MKHSLQLKLGQHLALTPQLQQSIRLLQLSTLELNQELEQMLQDNPLLEREDEDEAGYAAADAPAHTAEAEAQSTETPAPENVESEPATALDDADWNDYSTASGDDEDNDYAHGSVSGATLREHLLNQLIVSPLTLRDRTLVAALIDDLDEAGFLTQPLADIIASLQAELEELEPEEVETALKHLQNMDPTGVGARNLAECLTLQLRTLPPDTPARDAAMRLTTHYLDLLAARDVGKLKKMLGIDDLTLRAARSLILSLNPRPGAAFGADETHYVIPDVYVRKVKGMWIASLNADAMPKLRVNRVYADILARHRESGGSQLASQLQEARWLIKNVQQRFDTILRVSQAIVDRQKHFFEHGEVAMRPLVLREIADVVELHESTISRVTTQKFMMTPRGLYELKYFFGSHVATDSGGACSSTAIRALIKQLIAAESGKKPLSDGQLAEVLGQQGIVVARRTVAKYRESLQIPPANMRRAL*