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scnpilot_solids1_trim150_scaffold_2733_7

Organism: SCNPILOT_SOLID_1_TRIM150_Hydrogenophilales_65_11

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 4988..5323

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C167F similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 223
  • Evalue 1.00e-55
30S ribosomal protein S30P / sigma 54 modulation protein; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 111.0
  • Bit_score: 201
  • Evalue 1.70e-49
Possible Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:AAZ96485.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 111.0
  • Bit_score: 201
  • Evalue 7.70e-49

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAATTTGAAGATTTCCGGTCATCACCTGGAAGTGACCCCAGCCATCCGCGACTATGTTTCCGAGAAGCTCGACCGCGTCAAGCGCCATTTCGACCACGTCATCAACCTGAACGTCATCATGCAGGTGGAAAAGCTGGTGCACAAAGCGGAGGCCACATTGCACGTCAAGGGCCATGATTTCCATGCCAGCAGCGAAGACGGCAACATGTACGCCGCGATCGATCTGCTGGCCGACAAACTGGATCGCCAGATCGTCAAGCACAAGGAAAAAATTTCGGACGTCCATCAGGACGGCGGCAGTTTGAAGCATCAACCGACGGAAAGCGCCGCCTGA
PROTEIN sequence
Length: 112
MNLKISGHHLEVTPAIRDYVSEKLDRVKRHFDHVINLNVIMQVEKLVHKAEATLHVKGHDFHASSEDGNMYAAIDLLADKLDRQIVKHKEKISDVHQDGGSLKHQPTESAA*