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scnpilot_solids1_trim150_scaffold_7858

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_7858_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(196..1320)
DNA (1125bp) protein (375aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transcription-repair-coupling factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WL90_9GAMM
transcription-repair coupling factor Mfd
scnpilot_solids1_trim150_scaffold_7858_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1416..1949)
DNA (534bp) protein (178aa)
Sortase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM93_9GAMM
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGI77862.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
sortase-like acyltransferase
scnpilot_solids1_trim150_scaffold_7858_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2010..2525)
DNA (516bp) protein (172aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VVL6_9GAMM
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL91257.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
starvation-inducible outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_7858_4

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comp(2601..3443)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717A88 rbh
Protein containing DUF519 {ECO:0000313|EMBL:EQD55967.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
protein involved in catabolism of external DNA
Displaying 4 items

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