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scnpilot_solids1_trim150_scaffold_783_6

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 8450..9397

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LysR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGQ0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 312.0
  • Bit_score: 347
  • Evalue 1.70e-92
Regulatory protein LysR {ECO:0000313|EMBL:EIL98641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 312.0
  • Bit_score: 347
  • Evalue 2.50e-92
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 310.0
  • Bit_score: 262
  • Evalue 2.30e-67

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGGAATCGCCGCAGCAGAACCTCACCGACATCTTCTATTTCGTCCAGGTGGTCAGGCATGGAAGCCTCACCCGCGCCGCCCAGGAATTGGGGGTGGCCAAATCGCGGCTGAGCACGCGACTGGCGCGGCTGGAGCGCCAACTGGGCGTTCGCCTGATCCAGCGCACCACCCGGCGGCTGCACGTGACCGACGTCGGCCACAGCTATTTCGATCACTGCCGCGGCGTGCTGGAAGCGGCCGAGCGCGCGCAGGACGTCATCGACGATGCCAAGGCCGCGCCGCGCGGGAGGATCCGGGTCGCGGCGCCCTCATCGTTCGTGCAGATGCTGCTCGAGCCGATCCTGCTCGACTTCATGGAGCGCAATCCCGAGGTACAAATCGATCTGGATCCCGCGCGCCAGGAAGCCGGGGTCGTGGCCGATGGCCATGATGTCGTGTTCAGGGTCCGCACTTCACTGGAAGATTCCAGCATGGTCGCGCGCAGCTTCGGGCTGGACCCGCAAGTCCTGGTGGGTGCGCCGGCCTTGCTGAAACGCGTGGACGGTTTGCGCAGGCCTTCCGATCTGAAAAATCTTTCCAGCGTGGCCACGCCGCCGCCGCCGGCAGGCCGGCATTTCTGGTTGTTGAGGCATGCCGAGGGCGGTACCGAGACACAGGTGGAGCACCATCCACGCCTGGTCAGTGACGACCTGCTCCTGCTGCGGCGGGCGGCGATCGGCGGTGTCGGCATCGTGCAGCTCCCCGAGTTCATCTGCCGCGCCGGCCTGCAATCCGGAAGCCTGAAGCGCGTGCTGCCGAAATGGGAATTGCCGCCCGGCAACGTGCACGCCCTGTACCCGACCCGCCGCGGCCACACCCCGGCGCTGCGCAGCTTCATCGAGTACGTCGCCCTGCGCGTGCCGCAAGCGCTGGAGGACCTGCAACGACGCGCGCCGCACGCCGTCTGA
PROTEIN sequence
Length: 316
MESPQQNLTDIFYFVQVVRHGSLTRAAQELGVAKSRLSTRLARLERQLGVRLIQRTTRRLHVTDVGHSYFDHCRGVLEAAERAQDVIDDAKAAPRGRIRVAAPSSFVQMLLEPILLDFMERNPEVQIDLDPARQEAGVVADGHDVVFRVRTSLEDSSMVARSFGLDPQVLVGAPALLKRVDGLRRPSDLKNLSSVATPPPPAGRHFWLLRHAEGGTETQVEHHPRLVSDDLLLLRRAAIGGVGIVQLPEFICRAGLQSGSLKRVLPKWELPPGNVHALYPTRRGHTPALRSFIEYVALRVPQALEDLQRRAPHAV*