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scnpilot_solids1_trim150_scaffold_783

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_783_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2243)
DNA (2241bp) protein (747aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WL78_9GAMM
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:AGG88418.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_783_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2255..3445)
DNA (1191bp) protein (397aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NCN6_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG88419.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_783_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3688..4383)
DNA (696bp) protein (232aa)
Cytochrome c4 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ94_9GAMM
Cytochrome c4 {ECO:0000313|EMBL:EIL89385.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c4
scnpilot_solids1_trim150_scaffold_783_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4394..6982)
DNA (2589bp) protein (863aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89386.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_783_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7017..8246)
DNA (1230bp) protein (410aa)
Cytochrome C family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP9_9GAMM
Cytochrome C family protein {ECO:0000313|EMBL:EIL98640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome C family protein
scnpilot_solids1_trim150_scaffold_783_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8450..9397
DNA (948bp) protein (316aa)
Regulatory protein LysR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGQ0_9GAMM
Regulatory protein LysR {ECO:0000313|EMBL:EIL98641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_783_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9434..10765)
DNA (1332bp) protein (444aa)
Carbohydrate-selective porin OprB n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR2_9GAMM
carbohydrate-selective porin
Carbohydrate-selective porin {ECO:0000313|EMBL:AGG87267.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_783_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10782..12209)
DNA (1428bp) protein (476aa)
Alcohol dehydrogenase cytochrome c subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR3_9GAMM
cytochrome c, mono- and diheme variants family
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AGG87268.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_783_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12206..13849)
DNA (1644bp) protein (548aa)
Glucose dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR4_9GAMM
choline dehydrogenase-like flavoprotein
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AGG87269.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_783_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13846..14373)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR5_9GAMM
Membrane bound FAD containing D-sorbitol dehydrogenase
Membrane bound FAD containing D-sorbitol dehydrogenase {ECO:0000313|EMBL:AGG87270.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_783_11
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14437..15000)
DNA (564bp) protein (188aa)
NADPH-dependent FMN reductase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B08B5
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KGQ20394.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
NADPH-dependent FMN reductase
scnpilot_solids1_trim150_scaffold_783_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15029..15574)
DNA (546bp) protein (182aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI3_9GAMM
DSBA oxidoreductase {ECO:0000313|EMBL:EIL97524.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein-disulfide isomerase
scnpilot_solids1_trim150_scaffold_783_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15579..16061)
DNA (483bp) protein (161aa)
AhpC/TSA family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI4_9GAMM
AhpC/TSA family protein {ECO:0000313|EMBL:EIL97525.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peroxiredoxin
scnpilot_solids1_trim150_scaffold_783_14
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16374..16787
DNA (414bp) protein (138aa)
DoxX n=1 Tax=Burkholderia sp. YI23 RepID=G8MJR9_9BURK
doxX; DoxX protein; K15977 putative oxidoreductase
DoxX protein {ECO:0000313|EMBL:BAO91226.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
scnpilot_solids1_trim150_scaffold_783_15
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16849..18372)
DNA (1524bp) protein (508aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Catalase n=1 Tax=Azoarcus sp. KH32C RepID=H0PX65_9RHOO rbh
catalase rbh
scnpilot_solids1_trim150_scaffold_783_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18573..19352
DNA (780bp) protein (260aa)
putative oxidoreductase; K03366 (R,R)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.303]
diacetyl reductase, partial n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B44049
Putative oxidoreductase {ECO:0000313|EMBL:BAH37289.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_783_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19628..20338)
DNA (711bp) protein (237aa)
Phenol hydroxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK93_9GAMM
Phenol hydroxylase {ECO:0000313|EMBL:GAN45597.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flavodoxin reductase family protein
scnpilot_solids1_trim150_scaffold_783_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20710..21672
DNA (963bp) protein (321aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK92_9GAMM
ABC-type multidrug transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_783_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21669..22502
DNA (834bp) protein (278aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI00030CE157
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC-type polysaccharide/polyol phosphate export systems permease; K09686 antibiotic transport system permease protein
scnpilot_solids1_trim150_scaffold_783_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22537..23190
DNA (654bp) protein (218aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUX6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX14716.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids1_trim150_scaffold_783_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23438..23941)
DNA (504bp) protein (168aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374F037
O-6-methylguanine DNA methyltransferase
scnpilot_solids1_trim150_scaffold_783_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23947..24753)
DNA (807bp) protein (269aa)
tropinone reductase n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE987
Tropinone reductase {ECO:0000313|EMBL:GAN45503.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids1_trim150_scaffold_783_23
unknown

Not on your lists

comp(24761..24883)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 23 items

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