ggKbase home page

scnpilot_solids1_trim150_scaffold_783_7

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(9434..10765)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 430.0
  • Bit_score: 546
  • Evalue 2.80e-152
carbohydrate-selective porin similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 430.0
  • Bit_score: 544
  • Evalue 2.50e-152
Carbohydrate-selective porin {ECO:0000313|EMBL:AGG87267.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 430.0
  • Bit_score: 544
  • Evalue 1.10e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
GTGAGCGGACAACACAACCGTGACCGGGTACGGACGACCCTGTTGCTGGCGGGCTTCGTGACGTTGTCGACTGTCCGCCCGGCTCTCGCCCAGAGCACGCAAGGCGGCGCATCGTCCTCGCGCGCGACCCTGACCGGCGACTGGGGCGGATTGCGCACGCGACTCAAGGATCGCGGGATCACTTTCAATGCGCACTACGCCTCCGAGGGCGCCGCGATCATTTCCGGTGGACCGTATCGCACCGGACGCTACACGCATCAGTTCGACCTGGAGACGTTGTTCGATCTCGACAAGCTGGCCGGCATTCCGGATGCGCACGTCCAATTCACCCTGACCGACCGCTTCGGCCGCAGCCTCACGAACGACGTGCTGCACAACCAGTTCTCGGTGCAGGAGCTGTACGGCGCCGGCCAGAATTTCCGGCTGGCCGAACTGAATTACCAGCAGGATTTCGCCGACCACCGCATCCAGATCGAACTCGGCTGGTCGCCGCTCGGCGATCACCTCGCGAGGCTGCCGGATTTCTGCAAGTTCCAGAACGGCGTGATCTGCGGGCACGCCAATGCGATGACCACCAACAGCGGCGCGCACAACTTCCCGACCGCGCAATGGGGTGCGCGCATCACGGCGTATCCGGTGCCGCACTTCTACGTGACATCCGGCGTGTTCCAGGTGAACCCGGACGCCGGCGACAAGGACAAGGGCTTCGACCTCGGCTTCGACAGCACCGGCGTATTCGTGCCGGTGGAGTTCGGTTGGGAAACCGGGCGAGGCGAGGACGGCCTGCCCGGCGACTACAAGGTCGGCGCCTACTACAACTCGTCGGACACCCCCGACGTGTACGAGGACGTCAACGGCATGCCCGCGGCCTTCACGGGAGCGTCTTTCCTTGAACACAACGGCCGCTACGGTGCCTACGCCATCGCCAGCCAGACCATCTACAAACCCGATCCCGATTCGCCACACGGGTTGCGGCTCGGCGTGATGGCCGGCGGAGGCGATCGCGCAACTTCGCGTTACAGCTGGTTCTGGCTGGCAGGTGGCGTCTGGCAAGGCACCTTCGCGGGCCGCGACAAGGACTACATCGCGTTCATGGCCGGCTACGCGCGCACCAATCCACGCTTGACCCGCTACCAGCGCGAGCGCGACAGCATCGCGCCGGGCAGCGTCGGCATCCAGACCTACGAAAGCGTCGTCGAAGTCGACTACGGCGCGGTGGTCGCGCCGTGGCTCACCTTCCGGCCCAACCTGCAATACATCCTCCGTCCGGGCGGAACCGGCGCGATGCGCAACGCACTGGTGCTCGGACTGTACACGCAGGTGACGTTCTGA
PROTEIN sequence
Length: 444
VSGQHNRDRVRTTLLLAGFVTLSTVRPALAQSTQGGASSSRATLTGDWGGLRTRLKDRGITFNAHYASEGAAIISGGPYRTGRYTHQFDLETLFDLDKLAGIPDAHVQFTLTDRFGRSLTNDVLHNQFSVQELYGAGQNFRLAELNYQQDFADHRIQIELGWSPLGDHLARLPDFCKFQNGVICGHANAMTTNSGAHNFPTAQWGARITAYPVPHFYVTSGVFQVNPDAGDKDKGFDLGFDSTGVFVPVEFGWETGRGEDGLPGDYKVGAYYNSSDTPDVYEDVNGMPAAFTGASFLEHNGRYGAYAIASQTIYKPDPDSPHGLRLGVMAGGGDRATSRYSWFWLAGGVWQGTFAGRDKDYIAFMAGYARTNPRLTRYQRERDSIAPGSVGIQTYESVVEVDYGAVVAPWLTFRPNLQYILRPGGTGAMRNALVLGLYTQVTF*