ggKbase home page

scnpilot_solids1_trim150_scaffold_2453_6

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(6733..8022)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBK8_XANAP similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 429.0
  • Bit_score: 774
  • Evalue 7.90e-221
  • rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 429.0
  • Bit_score: 778
  • Evalue 4.50e-222
clpX; ATP-dependent clp protease ATP-binding subunit protein; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 429.0
  • Bit_score: 774
  • Evalue 2.50e-221
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGAGCGAAGACCGTCAGGGACGTAACACCGGCGACAACAGCAAGATCCTCTACTGCTCCTTCTGCGGGAAGAGCCAGCATGAGGTGCGCAAGCTGATCGCCGGGCCCAGCGTGTTCATCTGCGACGAGTGCGTGGAGCTCTGCAACGACATCATCCGCGAGGAACTCGAGGAGAAGGCGCAATCCAGCCGCAGCTCGCTGCCCAAGCCGCGCGAGATCCTCGAGGTGCTGGACCAGTACGTGATCGGCCAGCAGCGGGCGAAAAAGACGCTGGCGGTGGCCGTCTACAACCACTACAAGCGCATCGAGAGCCGGCAGAAGAACGACGACGTCGAGCTGGCCAAGTCCAACATCCTGCTGGTCGGCCCCACCGGCTCGGGCAAGACGCTGCTGGCGGAAACGCTGGCGCGCATGCTCAACGTACCGTTCACCATGGCCGACGCCACCACGCTGACCGAAGCCGGCTATGTCGGCGAGGACGTGGAAAACATCATCCAGAAGCTGCTGCAGAAGTGCGACTACGACGTCGAGAAGGCGCAGCACGGCATCGTCTACATCGACGAGATCGACAAGATCAGCCGCAAGTCCGAGAACCCGTCGATCACCCGCGACGTGTCCGGTGAAGGCGTGCAGCAGGCGCTGTTGAAGCTGATCGAAGGCACCCTCGCGAGCGTGCCGCCGCAGGGCGGGCGCAAGCATCCGCAGCAGGAGTTCCTGCAGGTCGACACGCGCAACATCCTGTTCATCGTCGGCGGCGCGTTCGCCGGCTTGGACAAGGTCATCCAGCAGCGATCCACCGAAGCGGGCGGCATCGGCTTCGGCGCCAAGGTGAAGAGCGCGGAGCGCAAGGCCGACGTCGGCCAGGTGCTGGCGCGGGTCGAGCCCGAGGACCTGATCAAGTACGGCCTGATCCCCGAATTCGTCGGTCGCCTGCCGGTGGTCGCCACGCTGGAAGAGCTGGACGAGGCGGCGCTGGTCAAGATCCTCACCGAGCCCAAGAACGCCATCACCAAGCAGTTCAAGAAGCTGTTCGAGATGGAAGGCGTGGAGCTGGAGATCCGCCCCGATGCACTGGCGGCGATCGCCAAGCAGGCGATCAAGCGCAAGACCGGCGCGCGCGGCCTGCGGACCATCGTCGAATCGGTGCTGCTGGACACCATGTACGAACTGCCGTCGCTGGAGAACGTCAGCAAGGTGGTGGTGGACGAGTCGGTGATCGAACACAAGTCCGAGCCGTACCTGATCTACCAGACCGTGCCGGCGCCGGCCAAGGCCGCGTCCGCGGACTGA
PROTEIN sequence
Length: 430
MSEDRQGRNTGDNSKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQSSRSSLPKPREILEVLDQYVIGQQRAKKTLAVAVYNHYKRIESRQKNDDVELAKSNILLVGPTGSGKTLLAETLARMLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGLDKVIQQRSTEAGGIGFGAKVKSAERKADVGQVLARVEPEDLIKYGLIPEFVGRLPVVATLEELDEAALVKILTEPKNAITKQFKKLFEMEGVELEIRPDALAAIAKQAIKRKTGARGLRTIVESVLLDTMYELPSLENVSKVVVDESVIEHKSEPYLIYQTVPAPAKAASAD*