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scnpilot_solids1_trim150_scaffold_2453_7

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(8164..8787)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 203.0
  • Bit_score: 361
  • Evalue 6.30e-97
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 207.0
  • Bit_score: 357
  • Evalue 2.70e-96
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUV6_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 207.0
  • Bit_score: 357
  • Evalue 8.50e-96

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGATCCGATCAAGAACCTCAACCTGGTGCCGATGGTGGTCGAACAGACCAGCCGCGGCGAGCGCGCGTACGACATCTACTCGCGCCTGCTGAAGGAGCGGGTGATCTTCCTGGTCGGCGGCATCGACGACCACGTGGCCAACGTGGTCGTGGCGCAGATGCTGTTCCTCGAGGCGGAGAACCCCGAGAAGGACATCAGCCTGTACATCAACTCGCCGGGCGGCATCGTCACGGCGGGCATGGCGATCTACGACACCATGCAGTACATCAAGCCGGACGTCAGCACGATCTGCGTCGGCCAGGCCTGCTCGATGGGCGCGGTGCTGCTGGCGGCTGGCGCCGCCGGCAAGCGCTACGCGCTGCCGAACTCGCGGGTCATGATCCACCAGCCGCTGGGCGGCGCCCAGGGCCAGGCCACCGACATCGACATCCAGGCGCGCGAGATCCTGGCGATGCGCGAGCGCCTGAACGAGATCCTGGCCCGCCATACCGGCCAGGCCATCGACGTGATCGCCCGCGACACCGAGCGCGACAACTTCAAGAGCGCCGAGGCCGCCCGCGACTACGGGCTGGTGGACGAAGTGCTCAGCCGGCGCCCGGAAGAGTCGATCCAGACCAGCTGA
PROTEIN sequence
Length: 208
MDPIKNLNLVPMVVEQTSRGERAYDIYSRLLKERVIFLVGGIDDHVANVVVAQMLFLEAENPEKDISLYINSPGGIVTAGMAIYDTMQYIKPDVSTICVGQACSMGAVLLAAGAAGKRYALPNSRVMIHQPLGGAQGQATDIDIQAREILAMRERLNEILARHTGQAIDVIARDTERDNFKSAEAARDYGLVDEVLSRRPEESIQTS*