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scnpilot_solids1_trim150_scaffold_3038_curated_4

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(3694..3966)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381E1AD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 1.30e-43
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KGM52058.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 184
  • Evalue 7.90e-44
trbD1; conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 4.00e-44

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAGTGCCCCGGACACCTTCGCGGCCGGGTTCGAGGTGCCGCTGCATCGCTCGCTCACCGAGCCGATCTTGCTGGGCGGCGCACCGCGCACCGTGGCGATCGCCAACGGCACCTTGGCCGCCGCTGTCGGGCTGGGCCTGCAACTGTGGATTCCCGGTGTCGTGCTCTGGATCGTCGGCCATGCGCTGGCGGTCTGGGGCGCGCGCGTCGATCCGCAGTTCATGGCCGTGTTCGCCCGGCACATCAAGCACCGCCCGCTGCTGGACGTGTGA
PROTEIN sequence
Length: 91
MSAPDTFAAGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHALAVWGARVDPQFMAVFARHIKHRPLLDV*