ggKbase home page

scnpilot_solids1_trim150_scaffold_3038_curated_5

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(3963..4349)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=3 Tax=Comamonadaceae RepID=E8TV33_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 244
  • Evalue 6.50e-62
conjugal transfer protein trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 244
  • Evalue 2.00e-62
TrbC/VIRB2 family protein {ECO:0000313|EMBL:KIN88229.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 244
  • Evalue 9.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera sp. SWB20 → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGACGCACGTTGATGCTTTCCGTATTTCTGTAAATCCGCTTTCCCGCCGCTCCAGTCCCGCGCGGCTGGATGGCCTGGCTCGCCCGGCCATGCAAGGCTTGATGCTCGCTGCCTTCATGCTGCTGCTTGCGGGCACTGCGCAGGCTGCCGGCTCCTCGATGCCCTGGGAAGGGCCGCTGCAATCCATCCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATCGCCACGGGCCTCGCGCTCGCGTTCGGCGACACGTCGGGCGGCTTTCGCAAGCTGATCCAGATCGTGTTCGGCTTGAGCATCGCCTTCGCCGCGTCCTCGTTCTTCCTGTCGTTCTTCAGCTTCTCGGGCGGGGCCGTCGTATGA
PROTEIN sequence
Length: 129
MTHVDAFRISVNPLSRRSSPARLDGLARPAMQGLMLAAFMLLLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*