ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 401-450 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_21764_curated Species: Elizabethkingia miricola (50%)	2	1613 bp	38.13	1.00	34.04
scnpilot_solids1_trim150_scaffold_18146_curated Species: Chryseobacterium solincola (50%)	2	1880 bp	39.63	1.00	89.04
scnpilot_solids1_trim150_scaffold_40670_curated Species: Psychroflexus gondwanensis (50%)	2	1052 bp	34.32	1.00	96.10
scnpilot_solids1_trim150_scaffold_42142_curated Species: R_Fluviicola_43_260 (100%)	2	1017 bp	38.05	1.00	99.71
scnpilot_solids1_trim150_scaffold_12166_curated Species: Joostella marina (50%)	2	2344 bp	42.88	1.00	91.51
scnpilot_solids1_trim150_scaffold_29372_curated Species: Flavobacterium enshiense (50%)	2	1334 bp	48.88	1.00	95.58
scnpilot_solids1_trim150_scaffold_39059_curated Species: Joostella marina (100%)	2	1084 bp	35.79	1.00	99.35
scnpilot_solids1_trim150_scaffold_15272_curated Species: Bergeyella zoohelcum (50%)	2	2128 bp	41.31	1.00	99.11
scnpilot_solids1_trim150_scaffold_38294_curated Species: Fluviicola taffensis (100%)	2	1926 bp	37.80	1.00	47.51
scnpilot_solids1_trim150_scaffold_25725_curated Species: Flavobacterium subsaxonicum (50%)	2	1374 bp	45.20	1.00	83.41
scnpilot_solids1_trim150_scaffold_25480_curated Species: Chryseobacterium sp. P1-3 (50%)	2	1333 bp	42.61	1.00	76.74
scnpilot_solids1_trim150_scaffold_28614_curated Species: Weeksella virosa (50%)	2	1359 bp	45.62	1.00	103.75
scnpilot_solids1_trim150_scaffold_12046_curated Species: Fluviicola taffensis (50%)	2	2451 bp	37.21	1.00	96.08
scnpilot_solids1_trim150_scaffold_23848_curated Species: Flavobacterium frigoris (50%)	2	1551 bp	36.94	1.00	99.23
scnpilot_solids1_trim150_scaffold_29972_curated Species: Flavobacterium enshiense (50%)	2	1315 bp	38.17	1.00	75.97
scnpilot_solids1_trim150_scaffold_13831_curated Species: Chryseobacterium sp. StRB126 (50%)	2	2085 bp	38.23	1.00	85.04
scnpilot_solids1_trim150_scaffold_6463_curated Species: Flavobacterium subsaxonicum (50%)	2	3962 bp	44.19	1.00	97.15
scnpilot_solids1_trim150_scaffold_37577_curated Species: Elizabethkingia miricola (50%)	2	1115 bp	37.13	1.00	74.80
scnpilot_solids1_trim150_scaffold_15799_curated Species: Hassallia byssoidea (50%)	2	2078 bp	39.80	1.00	90.38
scnpilot_solids1_trim150_scaffold_77019_curated Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1252 bp	39.14	1.00	78.35
scnpilot_solids1_trim150_scaffold_10279_curated Species: Formosa sp. AK20 (100%)	2	2730 bp	40.59	1.00	89.56
scnpilot_solids1_trim150_scaffold_43108_curated Species: R_Fluviicola_43_260 (50%)	2	863 bp	35.69	1.00	81.00
scnpilot_solids1_trim150_scaffold_42698_curated Species: Chryseobacterium sp. JM1 (100%)	2	996 bp	42.67	1.00	100.30
scnpilot_solids1_trim150_scaffold_16200_curated Species: Fluviicola taffensis (100%)	2	1928 bp	41.86	1.00	90.56
scnpilot_solids1_trim150_scaffold_40385_curated Species: Riemerella anatipestifer (50%)	2	1056 bp	42.42	1.00	92.05
scnpilot_solids1_trim150_scaffold_22013_curated Species: Chryseobacterium sp. JM1 (50%)	2	1524 bp	44.75	1.00	101.57
scnpilot_solids1_trim150_scaffold_33461_curated Species: Elizabethkingia miricola (100%)	2	1214 bp	40.20	1.00	98.35
scnpilot_solids1_trim150_scaffold_39540_curated Species: Flavobacterium hydatis (50%)	2	1074 bp	42.74	1.00	96.93
scnpilot_solids1_trim150_scaffold_37475_curated Species: Chryseobacterium sp. StRB126 (50%)	2	1032 bp	48.16	1.00	96.51
scnpilot_solids1_trim150_scaffold_18655_curated Species: Chryseobacterium solincola (50%)	2	1843 bp	36.84	1.00	98.16
scnpilot_solids1_trim150_scaffold_20893_curated Species: Owenweeksia hongkongensis (50%)	2	1703 bp	38.40	1.00	66.41
scnpilot_solids1_trim150_scaffold_6686_curated Species: Weeksella virosa (50%)	2	3793 bp	36.94	1.00	99.74
scnpilot_solids1_trim150_scaffold_38375_curated Species: R_Fluviicola_43_260 (50%)	2	939 bp	39.72	1.00	95.85
scnpilot_solids1_trim150_scaffold_35366_curated Species: Chryseobacterium soli (50%)	2	1129 bp	40.04	1.00	94.60
scnpilot_solids1_trim150_scaffold_31355_curated Species: Flavobacterium sp. EM1321 (50%)	2	1114 bp	43.63	1.00	98.56
scnpilot_solids1_trim150_scaffold_43531_curated Species: Flavobacterium sp. MEB061 (50%)	2	813 bp	52.89	1.00	83.03
scnpilot_solids1_trim150_scaffold_29391_curated Species: Fluviicola taffensis (50%)	2	1096 bp	40.24	1.00	91.42
scnpilot_solids1_trim150_scaffold_23001_curated Species: Chryseobacterium antarcticum (50%)	2	1593 bp	35.22	1.00	92.28
scnpilot_solids1_trim150_scaffold_41757_curated Species: Chryseobacterium indologenes (50%)	2	1030 bp	36.31	1.00	70.78
scnpilot_solids1_trim150_scaffold_33501_curated Species: Fluviicola taffensis (50%)	2	1213 bp	44.77	1.00	101.15
scnpilot_solids1_trim150_scaffold_26281_curated Species: Chryseobacterium luteum (50%)	2	1447 bp	36.97	1.00	86.87
scnpilot_solids1_trim150_scaffold_42904_curated Species: Chryseobacterium formosense (50%)	2	1010 bp	36.83	1.00	95.64
scnpilot_solids1_trim150_scaffold_23839_curated Species: Fluviicola taffensis (100%)	2	1551 bp	44.04	1.00	99.42
scnpilot_solids1_trim150_scaffold_16781_curated Species: R_Fluviicola_43_260 (50%)	2	1997 bp	36.91	1.00	99.60
scnpilot_solids1_trim150_scaffold_24116_curated Species: Chryseobacterium luteum (50%)	2	1232 bp	39.37	1.00	93.51
scnpilot_solids1_trim150_scaffold_27636_curated Species: Fluviicola taffensis (50%)	2	1119 bp	39.59	1.00	87.67
scnpilot_solids1_trim150_scaffold_38474_curated Species: R_Fluviicola_43_260 (50%)	2	1096 bp	39.51	1.00	98.54
scnpilot_solids1_trim150_scaffold_25092_curated Species: Elizabethkingia meningoseptica (50%)	2	1427 bp	38.33	1.00	80.94
scnpilot_solids1_trim150_scaffold_19222_curated Species: Fluviicola taffensis (50%)	2	1807 bp	31.16	1.00	43.00
scnpilot_solids1_trim150_scaffold_37713_curated Species: Winogradskyella sp. PG-2 (50%)	2	1123 bp	39.27	1.00	71.06

Displaying items 401-450 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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