ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 351-400 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_31740_curated Species: Formosa sp. AK20 (50%)	2	1261 bp	37.99	1.00	87.55
scnpilot_solids1_trim150_scaffold_33745_curated Species: Chryseobacterium antarcticum (50%)	2	1206 bp	39.30	1.00	87.81
scnpilot_solids1_trim150_scaffold_31369_curated Species: Elizabethkingia miricola (100%)	2	1272 bp	36.56	1.00	99.29
scnpilot_solids1_trim150_scaffold_35556_curated Species: Epilithonimonas sp. FH1 (50%)	2	1161 bp	43.32	1.00	76.23
scnpilot_solids1_trim150_scaffold_27892_curated Species: Cellulophaga geojensis (50%)	2	1366 bp	39.09	1.00	95.31
scnpilot_solids1_trim150_scaffold_42004_curated Species: Chryseobacterium solincola (100%)	2	958 bp	43.11	1.00	100.84
scnpilot_solids1_trim150_scaffold_38488_curated Species: Bizionia argentinensis (50%)	2	1095 bp	37.44	1.00	84.38
scnpilot_solids1_trim150_scaffold_39330_curated Species: Fluviicola taffensis (50%)	2	1078 bp	34.23	1.00	69.02
scnpilot_solids1_trim150_scaffold_18388_curated Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)	2	1863 bp	30.97	1.00	60.39
scnpilot_solids1_trim150_scaffold_33912_curated Species: Elizabethkingia anophelis (50%)	2	1202 bp	34.03	1.00	74.13
scnpilot_solids1_trim150_scaffold_36732_curated Species: R_Fluviicola_43_260 (50%)	2	1045 bp	36.56	1.00	88.71
scnpilot_solids1_trim150_scaffold_30761_curated Species: Elizabethkingia meningoseptica (50%)	2	1137 bp	40.72	1.00	86.81
scnpilot_solids1_trim150_scaffold_20044_curated Species: Weeksella virosa (100%)	2	1756 bp	39.69	1.00	93.79
scnpilot_solids1_trim150_scaffold_15260_curated Species: Flavobacterium sp. CF136 (50%)	2	2129 bp	42.32	1.00	89.90
scnpilot_solids1_trim150_scaffold_33410_curated Species: Zunongwangia profunda (50%)	2	1215 bp	42.55	1.00	70.62
scnpilot_solids1_trim150_scaffold_29497_curated Species: Fluviicola taffensis (100%)	2	1267 bp	41.83	1.00	98.50
scnpilot_solids1_trim150_scaffold_43540_curated Species: R_Fluviicola_43_260 (50%)	2	870 bp	38.74	1.00	91.38
scnpilot_solids1_trim150_scaffold_37941_curated Species: Elizabethkingia sp. BM10 (50%)	2	1107 bp	32.70	1.00	99.19
scnpilot_solids1_trim150_scaffold_35397_curated Species: Fluviicola taffensis (50%)	2	1117 bp	37.60	1.00	100.72
scnpilot_solids1_trim150_scaffold_33252_curated Species: Flavobacterium hibernum (50%)	2	1162 bp	39.33	1.00	71.77
scnpilot_solids1_trim150_scaffold_25466_curated Species: Flavobacterium cauense (50%)	2	1481 bp	36.19	1.00	95.00
scnpilot_solids1_trim150_scaffold_37883_curated Species: Gramella forsetii (50%)	2	1092 bp	34.71	1.00	23.08
scnpilot_solids1_trim150_scaffold_41369_curated Species: Elizabethkingia sp. BM10 (50%)	2	964 bp	40.66	1.00	95.23
scnpilot_solids1_trim150_scaffold_17777_curated Species: Kordia algicida (50%)	2	1908 bp	44.39	1.00	87.89
scnpilot_solids1_trim150_scaffold_27872_curated Species: R_Fluviicola_43_260 (50%)	2	1385 bp	38.84	1.00	99.86
scnpilot_solids1_trim150_scaffold_32903_curated Species: Flavobacterium beibuense (50%)	2	1228 bp	39.09	1.00	67.92
scnpilot_solids1_trim150_scaffold_24564_curated Species: Chryseobacterium luteum (50%)	2	1518 bp	47.76	1.00	94.27
scnpilot_solids1_trim150_scaffold_24219_curated Species: Epilithonimonas lactis (50%)	2	1533 bp	40.97	1.00	94.91
scnpilot_solids1_trim150_scaffold_20487_curated Species: R_Fluviicola_43_260 (100%)	2	1617 bp	41.50	1.00	98.89
scnpilot_solids1_trim150_scaffold_31421_curated Species: Bergeyella zoohelcum (50%)	2	1270 bp	35.91	1.00	54.09
scnpilot_solids1_trim150_scaffold_106748_curated Species: Elizabethkingia miricola (50%)	2	1033 bp	30.30	1.00	29.91
scnpilot_solids1_trim150_scaffold_35232_curated Species: Chryseobacterium indologenes (50%)	2	1169 bp	38.49	1.00	92.64
scnpilot_solids1_trim150_scaffold_12226_curated Species: Sphingobacterium paucimobilis (50%)	2	2499 bp	33.85	1.00	40.94
scnpilot_solids1_trim150_scaffold_30913_curated Species: Chryseobacterium sp. CF314 (50%)	2	1156 bp	43.43	1.00	88.75
scnpilot_solids1_trim150_scaffold_31845_curated Species: Flavobacterium sp. F52 (50%)	2	1197 bp	40.10	1.00	71.93
scnpilot_solids1_trim150_scaffold_28968_curated Species: Epilithonimonas lactis (50%)	2	1347 bp	37.12	1.00	85.75
scnpilot_solids1_trim150_scaffold_41695_curated Species: Elizabethkingia sp. BM10 (50%)	2	1031 bp	35.11	1.00	66.63
scnpilot_solids1_trim150_scaffold_39895_curated Species: Flavobacterium sp. AED (100%)	2	1001 bp	38.76	1.00	100.70
scnpilot_solids1_trim150_scaffold_35619_curated Species: Elizabethkingia meningoseptica (50%)	2	1102 bp	34.30	1.00	86.03
scnpilot_solids1_trim150_scaffold_29781_curated Species: Fluviicola taffensis (100%)	2	1321 bp	35.12	1.00	63.82
scnpilot_solids1_trim150_scaffold_19120_curated Species: Flavobacterium suncheonense (50%)	2	1814 bp	43.16	1.00	79.71
scnpilot_solids1_trim150_scaffold_33445_curated Species: Flavobacterium beibuense (50%)	2	1112 bp	40.92	1.00	96.58
scnpilot_solids1_trim150_scaffold_32749_curated Species: Leeuwenhoekiella blandensis (50%)	2	1191 bp	39.04	1.00	100.00
scnpilot_solids1_trim150_scaffold_29685_curated Species: Epilithonimonas lactis (50%)	2	1324 bp	46.60	1.00	92.67
scnpilot_solids1_trim150_scaffold_33889_curated Species: Chryseobacterium luteum (50%)	2	1203 bp	35.49	1.00	99.25
scnpilot_solids1_trim150_scaffold_29016_curated Species: Chryseobacterium gleum (50%)	2	2056 bp	37.50	1.00	58.95
scnpilot_solids1_trim150_scaffold_21447_curated Species: Flavobacterium sp. AED (50%)	2	1564 bp	41.37	1.00	76.15
scnpilot_solids1_trim150_scaffold_30755_curated Species: Aequorivita sublithincola (50%)	2	1292 bp	39.63	1.00	88.00
scnpilot_solids1_trim150_scaffold_43664_curated Species: Flavobacterium psychrophilum (50%)	2	998 bp	38.98	1.00	92.89
scnpilot_solids1_trim150_scaffold_20621_curated Species: R_Fluviicola_43_260 (50%)	2	1721 bp	32.83	1.00	95.35

Displaying items 351-400 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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