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scnpilot_solids1_trim150_scaffold_381_curated

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_381_curated_1
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

321..722
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PR24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB90152.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
scnpilot_solids1_trim150_scaffold_381_curated_2
unknown

Not on your lists

886..1149
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_381_curated_3
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1169..1921
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K0D2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR73394.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
RHS repeat-associated core domain-containing protein
scnpilot_solids1_trim150_scaffold_381_curated_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1908..2216
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WCQ2_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF97573.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2225..2788
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTQ7_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFA93581.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
scnpilot_solids1_trim150_scaffold_381_curated_6
unknown

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2980..3507
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_381_curated_7
unknown

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comp(3652..3888)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_381_curated_8
unknown

Not on your lists

comp(4121..4456)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_381_curated_9
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4825..5460
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:AHW61049.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
Putative uncharacterized protein id=4565887 bin=GWF2_Bacteroidetes_42_66 species=Croceibacter atlanticus genus=Croceibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5618..6190)
DNA (573bp) protein (191aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF71_NIAKG
scnpilot_solids1_trim150_scaffold_381_curated_11
unknown

Not on your lists

6235..6417
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_381_curated_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6549..7811
DNA (1263bp) protein (421aa)
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF72_NIAKG
Cytochrome C {ECO:0000313|EMBL:KIC91100.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit
scnpilot_solids1_trim150_scaffold_381_curated_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

7900..11142
DNA (3243bp) protein (1081aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003799C13
Fe-S-cluster-containing hydrogenase subunit
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_381_curated_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11207..12658
DNA (1452bp) protein (484aa)
quinol:cytochrome c oxidoreductase quinone-binding subunit 1; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
Fe-S-cluster-containing hydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI0003690608
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_381_curated_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12726..13310
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003736940
Quinol:cytochrome C oxidoreductase {ECO:0000313|EMBL:KIC96458.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
quinol:cytochrome c oxidoreductase membrane protein
scnpilot_solids1_trim150_scaffold_381_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13380..14021
DNA (642bp) protein (214aa)
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF76_NIAKG
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:AEW02696.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_381_curated_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14048..15283
DNA (1236bp) protein (412aa)
quinol:cytochrome C oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI00036824BC
Quinol:cytochrome C oxidoreductase {ECO:0000313|EMBL:KIC91105.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
quinol:cytochrome c oxidoreductase quinone-binding subunit 2
scnpilot_solids1_trim150_scaffold_381_curated_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15475..16518
DNA (1044bp) protein (348aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF78_NIAKG
scnpilot_solids1_trim150_scaffold_381_curated_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16567..18378
DNA (1812bp) protein (604aa)
cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase n=1 Tax=Segetibacter koreensis RepID=UPI0003656FE9
Cytochrome C oxidase {ECO:0000313|EMBL:KIC96461.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_381_curated_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18460..19419
DNA (960bp) protein (320aa)
Protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FAE79
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_381_curated_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19445..20011
DNA (567bp) protein (189aa)
cytochrome C oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG35_CHIPD
Cytochrome oxidase subunit III {ECO:0000313|EMBL:KIC91109.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_381_curated_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20158..20892
DNA (735bp) protein (245aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF82_NIAKG
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:GAO42183.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_381_curated_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20941..21393
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C8A13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02703.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_381_curated_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21464..22177
DNA (714bp) protein (238aa)
electron transporter SenC n=1 Tax=Niabella aurantiaca RepID=UPI000368C0B2
Electron transporter SenC {ECO:0000313|EMBL:KIC91111.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
electron transport protein SCO1/SenC; K07152
scnpilot_solids1_trim150_scaffold_381_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22190..22792
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG66_NIAKG
hypothetical protein; K08976 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02705.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_381_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22799..23182)
DNA (384bp) protein (128aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG69_NIAKG
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein; K07443 methylated-DNA-protein-cysteine methyltransferase related protein
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein {ECO:0000313|EMBL:AEW02708.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_381_curated_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23381..26800
DNA (3420bp) protein (1140aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F595C
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIC91203.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PKD domain-containing protein
scnpilot_solids1_trim150_scaffold_381_curated_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27132..28901)
DNA (1770bp) protein (590aa)
Outer membrane protein n=4 Tax=Bacteroidales RepID=D7ITS4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN22971.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
RagB/SusD domain-containing protein
scnpilot_solids1_trim150_scaffold_381_curated_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28913..32587)
DNA (3675bp) protein (1225aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BMG1_9PORP
Membrane protein {ECO:0000313|EMBL:CDB50571.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_381_curated_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32798..33982)
DNA (1185bp) protein (395aa)
Putative anti-sigma factor {ECO:0000313|EMBL:GAO42041.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
FecR protein id=4652657 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
anti-FecI sigma factor FecR
Displaying items 1-30 of 92 in total

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