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scnpilot_solids1_trim150_scaffold_381_curated

Search features with annotation key words

Displaying items 31-60 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_381_curated_31
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34171..34734)
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGW9_NIAKG
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO42042.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_solids1_trim150_scaffold_381_curated_32
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35008..35439)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B729B
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KIC95131.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
BadM/Rrf2 family transcriptional regulator
scnpilot_solids1_trim150_scaffold_381_curated_33
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35443..35766)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037285E6
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:KIC89574.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_34
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35763..37052)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D4CD8F
Uncharacterized protein {ECO:0000313|EMBL:AHM62708.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_35
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37054..37857)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368937D
Uncharacterized protein {ECO:0000313|EMBL:GAO42691.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_36
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37859..38302)
DNA (444bp) protein (148aa)
Putative lipoprotein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2E9K6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC89571.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_37
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38444..39913)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034CDBA6
Hemerythrin {ECO:0000313|EMBL:KIC89570.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
iron-sulfur cluster repair di-iron protein
scnpilot_solids1_trim150_scaffold_381_curated_38
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40963..41880)
DNA (918bp) protein (306aa)
Putative sulfate-binding protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ15_9SPHI
Putative sulfate-binding protein {ECO:0000313|EMBL:EDM34529.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
ABC transporter substrate-binding protein
scnpilot_solids1_trim150_scaffold_381_curated_39
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41915..42370)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ14_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34528.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein; K09004 hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_40
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(42443..43468)
DNA (1026bp) protein (342aa)
Cytochrome c class I n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVQ9_SPILD
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADB42891.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids1_trim150_scaffold_381_curated_41
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43874..44923
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI0003611F8B
scnpilot_solids1_trim150_scaffold_381_curated_42
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44979..46415)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7Q1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44669.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_381_curated_43
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46433..48730)
DNA (2298bp) protein (766aa)
TonB-dependent receptor n=1 Tax=Niabella soli DSM 19437 RepID=H1NSU0_9SPHI
TonB-denpendent receptor {ECO:0000313|EMBL:AHF16727.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_381_curated_44
unknown

Not on your lists

comp(48885..49142)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F548B
scnpilot_solids1_trim150_scaffold_381_curated_45
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49515..50396
DNA (882bp) protein (294aa)
ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV56_CHIPD
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_381_curated_46
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50425..51123
DNA (699bp) protein (233aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Niabella soli DSM 19437 RepID=H1NRK8_9SPHI
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
scnpilot_solids1_trim150_scaffold_381_curated_47
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

51220..52431
DNA (1212bp) protein (404aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
diaminopimelate decarboxylase n=1 Tax=Segetibacter koreensis RepID=UPI0003810F90
scnpilot_solids1_trim150_scaffold_381_curated_48
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

52646..53890
DNA (1245bp) protein (415aa)
D-amino-acid dehydrogenase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino-acid dehydrogenase {ECO:0000313|EMBL:AEV98914.1}; EC=1.4.99.1 {ECO:0000313|EMBL:AEV98914.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-amino-acid dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT1_NIAKG
scnpilot_solids1_trim150_scaffold_381_curated_49
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54065..54943)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036CD8AB
AraC family transcriptional regulator
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU05012.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_381_curated_50
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

55241..56608
DNA (1368bp) protein (456aa)
Sugar transporter n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1K3_PEDHD
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ACU02979.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_381_curated_51
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

56800..58158
DNA (1359bp) protein (453aa)
L-fucose isomerase_2 domain protein id=4525439 bin=GWF2_Lentisphaerae_50_93 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=RBG_13_Spirochaetes_68_11_curated
scnpilot_solids1_trim150_scaffold_381_curated_52
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

58167..59318
DNA (1152bp) protein (384aa)
Putative uncharacterized protein id=4525441 bin=GWF2_Lentisphaerae_50_93 species=Clostridium clostridioforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PfkB domain-containing protein
Tax=GWF2_Lentisphaerae_50_93_curated
scnpilot_solids1_trim150_scaffold_381_curated_53
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59338..60726
DNA (1389bp) protein (463aa)
aminotransferase (EC:2.6.1.-)
4-aminobutyrate aminotransferase id=2057701 bin=GWA2_Bacteroidetes_A19_40_15 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_381_curated_54
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

60869..62314
DNA (1446bp) protein (482aa)
Putative uncharacterized protein id=4441634 bin=GWF2_Lentisphaerae_52_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
Tax=GWF2_Lentisphaerae_44_16_curated
scnpilot_solids1_trim150_scaffold_381_curated_55
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62464..63297
DNA (834bp) protein (278aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003745F26
Aldolase {ECO:0000313|EMBL:ETZ24583.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids1_trim150_scaffold_381_curated_56
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

63557..64399
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTM0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92963.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_381_curated_57
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

64935..67997
DNA (3063bp) protein (1021aa)
TonB-dependent receptor n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZLH9_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EON74927.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_381_curated_58
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

68016..69521
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003670550
Putative outer membrane protein probably involved in nutrient binding protein {ECO:0000313|EMBL:EON74926.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
RagB/SusD domain-containing protein
scnpilot_solids1_trim150_scaffold_381_curated_59
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

69553..71625
DNA (2073bp) protein (691aa)
id=4319089 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_381_curated_60
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

72323..73321
DNA (999bp) protein (333aa)
Xanthan lyase n=1 Tax=Niabella soli DSM 19437 RepID=H1NL74_9SPHI
Xanthan lyase {ECO:0000313|EMBL:AHF14301.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xanthan lyase
Displaying items 31-60 of 92 in total

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