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scnpilot_solids1_trim150_scaffold_381_curated_49

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(54065..54943)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036CD8AB similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 287.0
  • Bit_score: 252
  • Evalue 4.20e-64
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 293.0
  • Bit_score: 236
  • Evalue 1.30e-59
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU05012.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 293.0
  • Bit_score: 236
  • Evalue 5.60e-59

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 879
ATGCAGCCAAAACTTGAAAAGATACCTTTTAATCATTTATCGTCCATTACCGTAAAGAGAGAAATAACGCCTTATATGGATTATCCATGGCATTATCATCCGGAATTTGAGATCATTTTTGTTGAAAAAAGTTATGGAATCCGGTTCATGGGCAGCCACATCGGGAATTTTTCTGATGGAGATTTGATGTTCATTAGCTCTGATCTGCCACATGTATGGAAGAACGACAGGGATTTTTACCAGGGTAACAAAGATCTCTTTGTAGATGTATATGTGATCCACTTTCGTAAAGATGCATTCAATGAGGGATTTTTTGATTTACCGGAATTTACCCAAATCAGAAAGCTGTTTTTATCAGGGCAACAAGGCCTCTTAGTACGTGAGGGAGAAGATCATAAGAAAATATCATCATTAGTAAAACAGGTCGTTTCATCTTCGGGAATTGACCGGTTAATTTTATTTTTAAAGACACTGGATGCCTTTGCTAATACAAAGGAATACGACCTTCTTTCAATGATCGGCTATGAAAATTCTGTTGACCTTGCGGATGCGGAAAGGATAAATACAGTGATGAACTTTGTAATGACCAATTACTCTGAAGATATTAAAATATCAAAGATCGCTAAATTGATCAGCCTCACCGAAGCATCATTTTGCAGGTATTTTAAATCCAAAACTCACAAAACGTTTTCACAATTCCTCAATGAAGTCAGGATCCTCAATGCCTGTAAATTATTAGTGGACAACAATATGACCATCACTCAAATTTGCTATAATACCGGGTATAATAATATTTCACATTTTAACCGGCAGTTTAAACTGATAACCGGGTTAACCGCGAAAGAGTATGCAAAAAAATACCTGAGCGAATCTTTTTAG
PROTEIN sequence
Length: 293
MQPKLEKIPFNHLSSITVKREITPYMDYPWHYHPEFEIIFVEKSYGIRFMGSHIGNFSDGDLMFISSDLPHVWKNDRDFYQGNKDLFVDVYVIHFRKDAFNEGFFDLPEFTQIRKLFLSGQQGLLVREGEDHKKISSLVKQVVSSSGIDRLILFLKTLDAFANTKEYDLLSMIGYENSVDLADAERINTVMNFVMTNYSEDIKISKIAKLISLTEASFCRYFKSKTHKTFSQFLNEVRILNACKLLVDNNMTITQICYNTGYNNISHFNRQFKLITGLTAKEYAKKYLSESF*