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SCNpilot_solid_2_scaffold_137

Search features with annotation key words

Displaying items 151-180 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_137_150
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169447..170925)
DNA (1479bp) protein (493aa)
Type II and III secretion system protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3U3_9BRAD rbh
Type II and III secretion system protein {ECO:0000313|EMBL:EFI52623.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
cpaC; Flp pilus assembly protein CpaC; K02280 pilus assembly protein CpaC rbh
SCNpilot_solid_2_scaffold_137_151
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171042..171566)
DNA (525bp) protein (175aa)
peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKF5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30782.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_137_152
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171862..172032)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NX76_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30783.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K02651 pilus assembly protein Flp/PilA
SCNpilot_solid_2_scaffold_137_153
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172397..173221
DNA (825bp) protein (275aa)
Flp pilus assembly protein CpaB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T9_9BRAD rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EFI52619.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source=
cpaB; Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB rbh
SCNpilot_solid_2_scaffold_137_154
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173586..174131
DNA (546bp) protein (182aa)
TadE family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T8_9BRAD rbh
Flp pilus assembly protein TadG {ECO:0000313|EMBL:CEG06793.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
hypothetical protein
SCNpilot_solid_2_scaffold_137_155
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174152..174739
DNA (588bp) protein (196aa)
Flp pilus assembly protein TadG n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T7_9BRAD rbh
Flp pilus assembly protein TadG {ECO:0000313|EMBL:CEG06794.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
hypothetical protein
SCNpilot_solid_2_scaffold_137_156
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174865..175071)
DNA (207bp) protein (69aa)
Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR58_NITHX
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE61289.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba
SCNpilot_solid_2_scaffold_137_157
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175298..175579)
DNA (282bp) protein (94aa)
Translation initiation factor IF-1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T5_9BRAD
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_solid_2_scaffold_137_158
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175598..177151)
DNA (1554bp) protein (518aa)
ATP-dependent RNA helicase RhlE (EC:3.6.1.-) rbh
DEAD/DEAH box helicase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T4_9BRAD rbh
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:CEG06797.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
SCNpilot_solid_2_scaffold_137_159
unknown

Not on your lists

177345..177446
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_137_160
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177933..179573
DNA (1641bp) protein (547aa)
Signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T2_9BRAD rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EFI52612.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1N
signal transduction histidine hinase rbh
SCNpilot_solid_2_scaffold_137_161
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179693..180241)
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=2 Tax=Afipia RepID=D6V3T1_9BRAD rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_solid_2_scaffold_137_162
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180241..180462)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52610.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_137_163
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180684..181484
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S9_9BRAD rbh
Putative transcriptional regulatory protein pdtaR {ECO:0000313|EMBL:CEG06802.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
response regulator with C-terminal receiver domain rbh
SCNpilot_solid_2_scaffold_137_164
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182128..182547)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06804.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_137_165
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182621..182956)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52606.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_137_166
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183058..184155)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S5_9BRAD rbh
Transport of quorum-sensing signal protein {ECO:0000313|EMBL:CEG06806.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fe
hypothetical protein rbh
SCNpilot_solid_2_scaffold_137_167
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184426..185214
DNA (789bp) protein (263aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S4_9BRAD rbh
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:CEG06807.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (
ErfK/YbiS/YcfS/YnhG family protein rbh
SCNpilot_solid_2_scaffold_137_168
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

185260..185910
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG06808.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_137_169
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186007..186165
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52602.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_137_170
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186349..188514)
DNA (2166bp) protein (722aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=666684 species="Bacteria; Proteo
glcB; malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] rbh
Malate synthase G n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S1_9BRAD rbh
SCNpilot_solid_2_scaffold_137_171
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188764..190680)
DNA (1917bp) protein (639aa)
NodQ bifunctional enzyme; Nodulation protein Q (EC:2.7.1.25 2.7.7.4); K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] rbh
Sulfate adenylyltransferase, large subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3S0_9BRAD rbh
Bifunctional enzyme CysN/CysC {ECO:0000313|EMBL:CEG06813.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
SCNpilot_solid_2_scaffold_137_172
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190694..191488)
DNA (795bp) protein (265aa)
cysD; sulfate adenylyltransferase, small subunit CysD (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] rbh
Phosphoadenosine phosphosulfate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R9_9BRAD rbh
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:EFI52599.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia s
SCNpilot_solid_2_scaffold_137_173
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191508..191822)
DNA (315bp) protein (105aa)
Ferredoxin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R8_9BRAD
Ferredoxin {ECO:0000313|EMBL:EFI52598.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
fdx; ferrodoxin Fdx; K04755 ferredoxin, 2Fe-2S
SCNpilot_solid_2_scaffold_137_174
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191965..193377
DNA (1413bp) protein (471aa)
cysG1; siroheme synthase (EC:2.1.1.107 1.3.1.76 4.99.1.4); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] rbh
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NTP9_AFIFE rbh
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EKS30805.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fe
SCNpilot_solid_2_scaffold_137_175
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193374..194078
DNA (705bp) protein (235aa)
cysH; phosphoadenosine phosphosulfate reductase CysH (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] rbh
Phosophoadenylyl-sulfate reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNX0_AFIFE rbh
Phosophoadenylyl-sulfate reductase {ECO:0000313|EMBL:EKS30806.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis AT
SCNpilot_solid_2_scaffold_137_176
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194202..195191
DNA (990bp) protein (330aa)
Sulfate-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKH7_AFIFE rbh
Sulfate-binding protein {ECO:0000313|EMBL:EKS30807.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cysP; ABC transporter, sulfate transport protein CysP; K02048 sulfate transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_137_177
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195296..196108
DNA (813bp) protein (271aa)
Sulfate ABC transporter, inner membrane subunit CysT n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R4_9BRAD rbh
Sulfate ABC transporter, inner membrane subunit CysT {ECO:0000313|EMBL:EFI52594.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc
cysT; sulfate ABC transporter permease CysT; K02046 sulfate transport system permease protein rbh
SCNpilot_solid_2_scaffold_137_178
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196110..196988
DNA (879bp) protein (293aa)
Sulfate ABC transporter, inner membrane subunit CysW n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R3_9BRAD rbh
Sulfate ABC transporter, inner membrane subunit CysW {ECO:0000313|EMBL:EFI52593.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc
cysW; sulfate ABC transporter permease; K02047 sulfate transport system permease protein rbh
SCNpilot_solid_2_scaffold_137_179
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196978..198024
DNA (1047bp) protein (349aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; Ta
sulfate/thiosulfate import ATP-binding protein CysA (EC:3.6.3.25); K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25] rbh
Sulfate ABC transporter, ATPase subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R2_9BRAD rbh
Displaying items 151-180 of 223 in total

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