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SCNpilot_solid_2_scaffold_137_156

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(174865..175071)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR58_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 5.40e-31
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 1.70e-31
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE61289.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 7.60e-31

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGGAACAGTGAAGTGGTTTAACGCGACCAAGGGCTACGGCTTCATTCAGCCGGATGATGGCGGCAACGACGTGTTCGTCCACGTCAGCGCCGTTGAGCGCGCCGGCCTCGGCACGCTGCGCGAAGGCCAGAAGATCAGCTACGAAATCGTTGCCGATCGCCGTTCGGGCAAGTCGTCTGCCGACAATCTTCGCGCGGCCGGCTAA
PROTEIN sequence
Length: 69
MGTVKWFNATKGYGFIQPDDGGNDVFVHVSAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*