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SCNpilot_solid_2_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_330_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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103..972
DNA (870bp) protein (290aa)
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SK7_RHOP5
ATPase
ATPase associated with various cellular activities, AAA_5 {ECO:0000313|EMBL:ABJ05077.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseud
SCNpilot_solid_2_scaffold_330_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1759..2085)
DNA (327bp) protein (109aa)
transposase n=1 Tax=Ochrobactrum anthropi RepID=UPI000287CE88
Transposase {ECO:0000313|EMBL:EXL06864.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_solid_2_scaffold_330_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2049..2639)
DNA (591bp) protein (197aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JGG2_9RHIZ
Transposase {ECO:0000313|EMBL:EXL06864.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
transposase IS116/IS110/IS902 family protein; K07486 transposase
SCNpilot_solid_2_scaffold_330_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3095..3610)
DNA (516bp) protein (172aa)
Transferase hexapeptide repeat containing protein n=2 Tax=Afipia RepID=D6V7Y8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29210.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transferase hexapeptide repeat containing protein
SCNpilot_solid_2_scaffold_330_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3896..5509)
DNA (1614bp) protein (538aa)
Alkylglycerone-phosphate synthase {ECO:0000313|EMBL:EFI52712.1}; EC=2.5.1.26 {ECO:0000313|EMBL:EFI52712.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
FAD linked oxidase, C-:FAD linked oxidase; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] rbh
Alkylglycerone-phosphate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V432_9BRAD rbh
SCNpilot_solid_2_scaffold_330_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5817..6830
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V433_9BRAD rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFI52713.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_330_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6919..8550)
DNA (1632bp) protein (544aa)
gsiA2; glutathione import ATP-binding protein GsiA (EC:3.6.3.-) rbh
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V434_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI52714.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
SCNpilot_solid_2_scaffold_330_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8543..9424)
DNA (882bp) protein (294aa)
ABC transporter permease protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BNT3_OLICM rbh
ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:AEI06660.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha
SCNpilot_solid_2_scaffold_330_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9433..10350)
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V436_9BRAD rbh
ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFI52716.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
SCNpilot_solid_2_scaffold_330_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10417..11934)
DNA (1518bp) protein (506aa)
Extracellular solute-binding protein family 5 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V437_9BRAD rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EFI52717.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
ABC transporter; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_330_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11980..13656)
DNA (1677bp) protein (559aa)
Dihydroxy-acid dehydratase IlvD {ECO:0000313|EMBL:AEI06663.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AEI06663.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
ilvD3; dihydroxy-acid dehydratase IlvD (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dehydratase family n=2 Tax=Oligotropha carboxidovorans RepID=B6JI49_OLICO rbh
SCNpilot_solid_2_scaffold_330_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13674..15014)
DNA (1341bp) protein (447aa)
FAD dependent oxidoreductase n=3 Tax=Oligotropha carboxidovorans RepID=B6JI48_OLICO rbh
FAD dependent oxidoreductase rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06664.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_330_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15014..16231)
DNA (1218bp) protein (406aa)
Caib/baif family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JI47_OLICO rbh
CaiB/BaiF family CoA-transferase rbh
CoA-transferase, CaiB/BaiF family protein {ECO:0000313|EMBL:AEI06665.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oli
SCNpilot_solid_2_scaffold_330_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16631..17617
DNA (987bp) protein (329aa)
Transcriptional regulator, LysR-family n=2 Tax=Oligotropha carboxidovorans RepID=F8BNT9_OLICM rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR-family {ECO:0000313|EMBL:AEI06666.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot
SCNpilot_solid_2_scaffold_330_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17552..18703)
DNA (1152bp) protein (384aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Afipia sp. 1NLS2 RepID=D6V442_9BRAD rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EFI52722.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
acyl-CoA transferase rbh
SCNpilot_solid_2_scaffold_330_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18700..19887)
DNA (1188bp) protein (396aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) rbh
Acyl-CoA dehydrogenase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V443_9BRAD rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EFI52723.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
SCNpilot_solid_2_scaffold_330_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19961..21142)
DNA (1182bp) protein (394aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Afipia sp. 1NLS2 RepID=D6V444_9BRAD rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EFI52724.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
formyl-CoA transferase rbh
SCNpilot_solid_2_scaffold_330_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21335..22084
DNA (750bp) protein (250aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V445_9BRAD rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EFI52725.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative 3-hydroxybutyryl-CoA dehydratase rbh
SCNpilot_solid_2_scaffold_330_19
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22458..22775)
DNA (318bp) protein (106aa)
Transposase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I236_9RHIZ
ISBm1, transposase orfB {ECO:0000313|EMBL:CDN51667.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" sourc
transposase
SCNpilot_solid_2_scaffold_330_20
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22787..23212)
DNA (426bp) protein (142aa)
Transposase of ISMex15, IS5 family (ORF 1) n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H3Y2_9RHIZ
Transposase {ECO:0000313|EMBL:KKC33105.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative transposase
SCNpilot_solid_2_scaffold_330_21
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23780..24049
DNA (270bp) protein (90aa)
Transposase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YMA8_9RHIZ
Transposase {ECO:0000313|EMBL:EHH02116.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS
IS30-family transposase
SCNpilot_solid_2_scaffold_330_22
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24498..24740)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI000378C627
Transposase {ECO:0000313|EMBL:CCG40977.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischia
transposase (Class II)
SCNpilot_solid_2_scaffold_330_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24762..25139)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI000378C627
Putative transposase {ECO:0000313|EMBL:CDL01341.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospiril
transposase
SCNpilot_solid_2_scaffold_330_24
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25211..25555)
DNA (345bp) protein (115aa)
Transposase (Class II) n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0M6_9BRAD
Transposase (Class II) {ECO:0000313|EMBL:EAQ34211.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311
transposase (class II)
SCNpilot_solid_2_scaffold_330_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25647..27059)
DNA (1413bp) protein (471aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNC6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42279.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
SCNpilot_solid_2_scaffold_330_26
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27135..27833)
DNA (699bp) protein (233aa)
Cyclase family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V422_9BRAD rbh
Cyclase family protein {ECO:0000313|EMBL:EFI52702.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cyclase family protein rbh
SCNpilot_solid_2_scaffold_330_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27849..28589)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI28_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42277.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_solid_2_scaffold_330_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28586..30382)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PL32_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42276.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_solid_2_scaffold_330_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30379..31254)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRZ3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42275.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_solid_2_scaffold_330_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31417..32610)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNC3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42274.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
extracellular ligand-binding receptor rbh
Displaying items 1-30 of 62 in total

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