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SCNpilot_solid_2_scaffold_330

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_330_31
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33053..33838
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PV96_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42273.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
LysR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_330_32
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34070..35158)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V7Z2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51352.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_330_33
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35440..36408)
DNA (969bp) protein (323aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] rbh
Putative 4,5-dihydroxyphthalate decarboxylase (DHP decarboxylase) {ECO:0000313|EMBL:CAL62255.1}; EC=4.1.1.55 {ECO:0000313|EMBL:CAL62255.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteob
Putative 4,5-dihydroxyphthalate decarboxylase (DHP decarboxylase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6W8_HERAR rbh
SCNpilot_solid_2_scaffold_330_34
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36455..37762)
DNA (1308bp) protein (436aa)
amidase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4] rbh
Putative amidase {ECO:0000313|EMBL:CAL62256.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CAL62256.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Hermin
Putative amidase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6W9_HERAR rbh
SCNpilot_solid_2_scaffold_330_35
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37873..39210)
DNA (1338bp) protein (446aa)
Putative major facilitator family transporter n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6X0_HERAR rbh
permease rbh
Putative major facilitator family transporter {ECO:0000313|EMBL:CAL62257.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" sou
SCNpilot_solid_2_scaffold_330_36
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39381..40307
DNA (927bp) protein (309aa)
Putative transcriptional regulator, LysR family n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6X1_HERAR rbh
LysR family transcriptional regulator rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:CAL62258.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" s
SCNpilot_solid_2_scaffold_330_37
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40468..41769)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V446_9BRAD rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
hypothetical protein rbh
SCNpilot_solid_2_scaffold_330_38
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41771..42928)
DNA (1158bp) protein (386aa)
FAD linked oxidase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V447_9BRAD rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:EFI52727.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2
glcE1; glycolate oxidase, subunit GlcE; K11472 glycolate oxidase FAD binding subunit rbh
SCNpilot_solid_2_scaffold_330_39
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42925..44382)
DNA (1458bp) protein (486aa)
glcD1; glycolate oxidase, subunit GlcD (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] rbh
FAD linked oxidase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V448_9BRAD rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:EFI52728.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2
SCNpilot_solid_2_scaffold_330_40
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44576..45355
DNA (780bp) protein (260aa)
GntR domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V449_9BRAD rbh
GntR domain protein {ECO:0000313|EMBL:EFI52729.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex rbh
SCNpilot_solid_2_scaffold_330_41
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46207..46572)
DNA (366bp) protein (122aa)
Transposase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PP57_9RHIZ
Putative transposase for insertion sequence element IS6501 {ECO:0000313|EMBL:EGG78495.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluc
transposase
SCNpilot_solid_2_scaffold_330_42
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46569..46961)
DNA (393bp) protein (131aa)
Putative transposase of ISAli12B, IS5 family subgroup IS427, ORFA n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB80_AZOL4
putative transposase of ISAli12B, IS5 family subgroup IS427, ORFA
Putative transposase of ISAli12B, IS5 family subgroup IS427, ORFA {ECO:0000313|EMBL:CBS91061.1}; Transposase of ISAli12B, IS5 family IS427 group, ORFA {ECO:0000313|EMBL:CBS85814.1}; Transposase of ISA
SCNpilot_solid_2_scaffold_330_43
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47046..47495)
DNA (450bp) protein (150aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R1_9BRAD
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:EFI51271.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
hypothetical protein
SCNpilot_solid_2_scaffold_330_44
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47523..48233)
DNA (711bp) protein (237aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R0_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51270.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_solid_2_scaffold_330_45
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48220..48975)
DNA (756bp) protein (252aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q9_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51269.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_solid_2_scaffold_330_46
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48972..49988)
DNA (1017bp) protein (339aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q8_9BRAD rbh
Inner-membrane translocator {ECO:0000313|EMBL:EFI51268.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
branched-chain amino acid ABC transporter permease
SCNpilot_solid_2_scaffold_330_47
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49985..50860)
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q7_9BRAD rbh
Inner-membrane translocator {ECO:0000313|EMBL:EFI51267.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
putative branched-chain amino acid ABC transporter permease protein rbh
SCNpilot_solid_2_scaffold_330_48
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50877..52127)
DNA (1251bp) protein (417aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q6_9BRAD rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51266.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_330_49
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52167..54542)
DNA (2376bp) protein (792aa)
carbon-monoxide dehydrogenase large subunit, coxL-like protein (EC:1.2.99.2); K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q5_9BRAD rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFI51265.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
SCNpilot_solid_2_scaffold_330_50
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54539..55048)
DNA (510bp) protein (170aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q4_9BRAD rbh
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:EFI51264.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
SCNpilot_solid_2_scaffold_330_51
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55045..55905)
DNA (861bp) protein (287aa)
carbon monoxide dehydrogenase medium subunit, coxM-like protein (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q3_9BRAD rbh
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFI51263.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
SCNpilot_solid_2_scaffold_330_52
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56121..56831
DNA (711bp) protein (237aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q2_9BRAD rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI51262.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
transcriptional regulator
SCNpilot_solid_2_scaffold_330_53
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57206..57982
DNA (777bp) protein (259aa)
Amidohydrolase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZFX1_9PROT
Amidohydrolase {ECO:0000313|EMBL:EKM98495.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
amidohydrolase; K07047
SCNpilot_solid_2_scaffold_330_54
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(57870..58301)
DNA (432bp) protein (144aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TP60_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF22354.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; e
SCNpilot_solid_2_scaffold_330_55
unknown

Not on your lists

comp(58295..58486)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_330_56
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58591..58791
DNA (201bp) protein (67aa)
Amidohydrolase 3 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M806_METRJ
amidohydrolase 3; K07047
Amidohydrolase 3 {ECO:0000313|EMBL:GAN47640.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp.
SCNpilot_solid_2_scaffold_330_57
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58788..59621
DNA (834bp) protein (278aa)
Cobalamin synthesis protein P47K n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YHW7_9PROT
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:EKM98496.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocel
cobalamin synthesis protein P47K
SCNpilot_solid_2_scaffold_330_58
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60657..60989
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H05_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08779.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_solid_2_scaffold_330_59
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60986..61588
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BE2_RHOPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD86294.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_solid_2_scaffold_330_60
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61610..62794)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NIK5_RHISP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF20930.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
putative IS1595 family protein rbh
Displaying items 31-60 of 62 in total

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