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SCNpilot_solid_2_scaffold_330_48

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(50877..52127)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 416.0
  • Bit_score: 784
  • Evalue 5.60e-224
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51266.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 416.0
  • Bit_score: 784
  • Evalue 7.90e-224
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 405.0
  • Bit_score: 605
  • Evalue 1.50e-170
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGACTGACATGAAACATACGGCCTTCTTTCCGCTCTCCCGCCGAGCCGCCTTGAAGGGACTGGGCGCTGGCGCGAGTTTGCTTGCGATGCCATGGATTGTGCGTGCGCAGACGAGCGACGTCATCAAGATCGGATTTCCGATGCCGCTGACGGGTCCGTTTGCTGCTGAAGCGAAGGACCAGGTGAAGAGCGCGCAGCTTGCGGTTCAACAGATCAACGACAAGGGTGGCGTCGTTGGTCGCAAGGTCGAACTCCTGGTGCGTGATGACAAGCTCAATGCCGGCGAAGCGGCGACGCGCGCGCTGGAGTTGATCGAGAACGACAAGGTGAATGCGATTGTCGGCGCGTTGTCGAGCGCGATTCAACTCGCAACCAACGAGGTCACGCGTGCGCGCGGGATGCTTTATATCTCCATCAGCCAGTCCGACAGCATCAACGAGGTGAAGGACTTCAGCAAATACACCTTCCACGAGGCGTTGAATCCCACTATGACCACGGCGGCCGTGGCGAAACACACCTTCAAGATGGGAGCAAGGGTTGCGTATCTCTGCGCCGACTATGCCTATGGTCACGAGATGCTGCGCGGATTCAAGCGCGCGGGAGATGCGATCGGAGCCGTCACTGTCGGTGAAATCCTGCATCCGATCGGAGCGCCAGATTACTCGACCTTCATTCCACGCATCAGTGCAATGAGTCCGGATATCCTCTGTATCTGCAATTTCGGCCGCGATCAGGCCAACTCCATCAAGCAGGCGGTCGATTTTGGCCTCAAGGACCGTATGAAGATTGTCGTGCCGGTTATCCTGCATAACCAGCGGCTGGCTGTCGGTCCTGACGTGTTCGAAGGTGTTATTGGCGGCTCGAACTATTATTGGGGCATGGAGGATACGGTTCCTTCCGCCAAGGTCTTTAACGATGCCTTCCGCGCGACGCATGGTGGCGCCACGCCGACCGACTATGGCGCCTACGGTTACACCGGCGTGATGTCGTTGTTGCTTGCGATGCAGGCTGCCGGCGGTACGGTTACGGACAAAATGGTCGCGTCGCTTGAAGGGTTGAAGTACGACGTTGCCAAGGGACCGCAGTATTATCGCAAATGCGATCACCAGTCGGTGCAGTCGGTTCTCGTTCTGGAATCAAAAAAGAAGGCCGAGATGAAGAGTGATCTCGATTTCTTCAAGATTCTGGCGACCGAACCGGCGTCCGAAAGCGTGTTGCGTAGCTGCGCAGAGCTTGGCCTCCCTACCTGA
PROTEIN sequence
Length: 417
MTDMKHTAFFPLSRRAALKGLGAGASLLAMPWIVRAQTSDVIKIGFPMPLTGPFAAEAKDQVKSAQLAVQQINDKGGVVGRKVELLVRDDKLNAGEAATRALELIENDKVNAIVGALSSAIQLATNEVTRARGMLYISISQSDSINEVKDFSKYTFHEALNPTMTTAAVAKHTFKMGARVAYLCADYAYGHEMLRGFKRAGDAIGAVTVGEILHPIGAPDYSTFIPRISAMSPDILCICNFGRDQANSIKQAVDFGLKDRMKIVVPVILHNQRLAVGPDVFEGVIGGSNYYWGMEDTVPSAKVFNDAFRATHGGATPTDYGAYGYTGVMSLLLAMQAAGGTVTDKMVASLEGLKYDVAKGPQYYRKCDHQSVQSVLVLESKKKAEMKSDLDFFKILATEPASESVLRSCAELGLPT*