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SCNpilot_solid_2_scaffold_28_153

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(168731..169411)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 225.0
  • Bit_score: 431
  • Evalue 7.10e-118
rlmE; ribosomal RNA large subunit methyltransferase E (EC:2.1.1.-); K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 225.0
  • Bit_score: 427
  • Evalue 3.00e-117
  • rbh
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5U9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 225.0
  • Bit_score: 431
  • Evalue 5.10e-118
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGCGAAAGACACCACCGGGCGGCTGCACGTCACGGTCAAGAGCGGTGGCAAGCGCAAGCTGTCATCCAAACTGTGGCTGGAGCGCCAGCTCAACGATCCCTATGTCGCGCAGGCCAAGCGCGAAGGTTATCGTTCGCGTGCCGCCTACAAACTGCGCGAGATGGACGACAAGTACCGCTTCCTGAAGCAGGGACAGGCGGTGGTCGATCTTGGTGCTGCGCCGGGCGGCTGGAGCCAGATCGCCGCGAAGCGCGTCGGCGCGGAGGCGGGCAGGGGCAAGGTCGTCGCCATCGACCTTCTGGAGATGGGGGAAATTCCCGGCGTCACCTTCGCGCAGCTTGATTTTCTCGCCGATGACGCGCCTTCGAGGCTGCGCGCGATGCTTGGCGGCGGCGCTGACATCGTGATGTCGGACATGGCCGCCAACACCACGGGGCATCGCAAGACCGATCAGCTGCGCATCGTCGGCCTTGTCGAAAGCGCGGCGGCGTTCGCGGCCGAGGTGCTCAATCCCGGCGGTGTGTTTCTCGCAAAAGTTTTTCAAAGCGGGGCCGATGCCACGCTGCAGAACGAACTGAAACGCAATTTCGCGACCGTGCGTCACGTCAAGCCGGCGGCGAGCCGCCAGGATTCCTCCGAGCGTTACGTGCTCGCGATGGGTTTTCGCGGCGGCAATTAA
PROTEIN sequence
Length: 227
MAKDTTGRLHVTVKSGGKRKLSSKLWLERQLNDPYVAQAKREGYRSRAAYKLREMDDKYRFLKQGQAVVDLGAAPGGWSQIAAKRVGAEAGRGKVVAIDLLEMGEIPGVTFAQLDFLADDAPSRLRAMLGGGADIVMSDMAANTTGHRKTDQLRIVGLVESAAAFAAEVLNPGGVFLAKVFQSGADATLQNELKRNFATVRHVKPAASRQDSSERYVLAMGFRGGN*