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SCNpilot_solid_2_scaffold_28

Search features with annotation key words

Displaying items 151-180 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_28_150
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164849..165211)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5V3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08307.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_28_151
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165290..166786)
DNA (1497bp) protein (499aa)
guaB; inosine-5'-monophosphate dehydrogenase GuaB (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5V2_9BRAD rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
SCNpilot_solid_2_scaffold_28_152
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167271..168734
DNA (1464bp) protein (488aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5V1_9BRAD rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI51698.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
mdtD; multidrug resistance protein MdtD rbh
SCNpilot_solid_2_scaffold_28_153
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168731..169411)
DNA (681bp) protein (227aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
rlmE; ribosomal RNA large subunit methyltransferase E (EC:2.1.1.-); K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] rbh
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5U9_9BRAD rbh
SCNpilot_solid_2_scaffold_28_154
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169454..170506)
DNA (1053bp) protein (351aa)
phosphatase, Ppx/GppA family protein; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] rbh
Ppx/GppA phosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5U8_9BRAD rbh
Exopolyphosphatase {ECO:0000313|EMBL:CEG08312.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease
SCNpilot_solid_2_scaffold_28_155
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170702..171160
DNA (459bp) protein (153aa)
UPF0178 protein AfiDRAFT_1980 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5U7_9BRAD
UPF0178 protein BN961_01727 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
hypothetical protein; K09768 hypothetical protein
SCNpilot_solid_2_scaffold_28_156
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171175..172992
DNA (1818bp) protein (606aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5U6_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51693.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
uup; ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup rbh
SCNpilot_solid_2_scaffold_28_157
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173064..174263)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJC6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28569.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_28_158
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174378..175601)
DNA (1224bp) protein (408aa)
HI0933 family flavoprotein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM09_AFIFE rbh
HI0933 family flavoprotein {ECO:0000313|EMBL:EKS28570.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690
hypothetical protein; K07007 rbh
SCNpilot_solid_2_scaffold_28_159
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175617..176504)
DNA (888bp) protein (296aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=883080 species="Bacteria; Proteob
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] rbh
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHN1_AFIFE rbh
SCNpilot_solid_2_scaffold_28_160
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176596..177228)
DNA (633bp) protein (211aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5U0_9BRAD rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI51687.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
TetR family transcriptional regulator
SCNpilot_solid_2_scaffold_28_161
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177359..178642
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T9_9BRAD rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI51686.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
MFS transporter protein rbh
SCNpilot_solid_2_scaffold_28_162
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178679..179941
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T8_9BRAD rbh
SCNpilot_solid_2_scaffold_28_163
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180291..183440)
DNA (3150bp) protein (1050aa)
Acriflavin resistance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T7_9BRAD rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EFI51684.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
multidrug resistance protein MdtB; Multidrug transporter mdtB rbh
SCNpilot_solid_2_scaffold_28_164
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183443..184591)
DNA (1149bp) protein (383aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T6_9BRAD rbh
Multidrug transporter MdtA {ECO:0000313|EMBL:CEG08326.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
mdtA1; multidrug resistance protein MdtA; K07799 putative multidrug efflux transporter MdtA rbh
SCNpilot_solid_2_scaffold_28_165
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184795..185286
DNA (492bp) protein (164aa)
Transcriptional regulator, MarR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T5_9BRAD
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFI51682.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
MarR family transcriptional regulator
SCNpilot_solid_2_scaffold_28_166
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185317..185526)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08328.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_28_167
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185523..186677)
DNA (1155bp) protein (385aa)
PepSY-associated TM helix domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T3_9BRAD rbh
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:EFI51680.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
PepSY-associated TM helix domain-containing protein rbh
SCNpilot_solid_2_scaffold_28_168
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186688..189054)
DNA (2367bp) protein (789aa)
TonB-dependent siderophore receptor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM15_AFIFE rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EKS28580.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis A
fhuA; ferrichrome-iron receptor FhuA; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_solid_2_scaffold_28_169
unknown

Not on your lists

189870..190139
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_28_trna_1
unknown

Not on your lists

comp(189999..190069)
DNA (71bp)
transferRNA
SCNpilot_solid_2_scaffold_28_170
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190435..192213
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51675.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K06915 rbh
SCNpilot_solid_2_scaffold_28_171
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192220..192678
DNA (459bp) protein (153aa)
MgtC/SapB transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S7_9BRAD
Putative Mg(2+) transport ATPase {ECO:0000313|EMBL:CEG08346.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_solid_2_scaffold_28_172
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192713..193336)
DNA (624bp) protein (208aa)
Putative ParB-like nuclease n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S6_9BRAD rbh
Putative ParB-like nuclease {ECO:0000313|EMBL:CEG08347.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
hypothetical protein rbh
SCNpilot_solid_2_scaffold_28_173
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193571..193855
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08348.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_28_174
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194030..194311
DNA (282bp) protein (94aa)
Acyl carrier protein n=5 Tax=Bradyrhizobiaceae RepID=F7QLN1_9BRAD
Phosphopantetheine-binding protein {ECO:0000313|EMBL:EFI51671.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
acyl carrier protein
SCNpilot_solid_2_scaffold_28_175
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194323..194790
DNA (468bp) protein (156aa)
fabA; 3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S3_9BRAD
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000313|EMBL:CEG08350.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
SCNpilot_solid_2_scaffold_28_176
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194787..195986
DNA (1200bp) protein (400aa)
3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
Beta-ketoacyl synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S2_9BRAD rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000313|EMBL:CEG08351.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia f
SCNpilot_solid_2_scaffold_28_177
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196002..197282
DNA (1281bp) protein (427aa)
fabF1; 3-oxoacyl-ACP synthase (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
Beta-ketoacyl synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S1_9BRAD rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:EFI51668.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_28_178
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197383..198405
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5S0_9BRAD rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFI51667.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="
alcohol dehydrogenase rbh
Displaying items 151-180 of 211 in total

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