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SCNpilot_solid_2_scaffold_28_164

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(183443..184591)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5T6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 382.0
  • Bit_score: 684
  • Evalue 5.60e-194
  • rbh
Multidrug transporter MdtA {ECO:0000313|EMBL:CEG08326.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 382.0
  • Bit_score: 684
  • Evalue 7.80e-194
mdtA1; multidrug resistance protein MdtA; K07799 putative multidrug efflux transporter MdtA similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 382.0
  • Bit_score: 625
  • Evalue 9.70e-177
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGACCAAGTCTGGACGACCTCGCTGGGGATTTTTGCTGATCGTGCTGGTGGCTGCCGGTGCCGCGGCTGCAGTGTGGTACGGCGGCAGCTCGCGCAAACCCAAGGTGGGGCCACCTCCGGCTGTTCCGGTGACGATTGCACCGGTCGAGAAGGCGGATTTTCCGGTTTATCTGTCCGGTCTCGGCACCGTGCAGGGGTTCAACACCGTGCAGGTCCGTACGCGCGTTGACGGCGAGATCACCCAGATCGTTTTCAGGGAAGGGCAATTCGTCAAGGAAGGCGATCTCCTGGCCCAGATCGATCCGCGTCCGTTCCAGGCGACGCTCGATGCGGCCAAGGCCAAGAAGGTGCAGGATGAGGCGAACCTCAACAACGCCAAGCTCGATCTTGCGCGCTCGACCAAGCTCGGCGAGTTTGCGACCCGTCAGACCGTCGATACCCAGAGCGCCAACGTGCTGCAGCTAAGCGCGCAGATCTTGGGCGATCAGGCTGCGATCGACAACGCCCAAACGCAACTCGATTACACCAGCATCCGCGCGCCGATCGCGGGCGTCACCGGCATCCGCATGGTCGACGTCGGCAATATCGTCACCGCCGCAGCGCAGACGGCCATCGTTTCCATCGCGCAGGTCGAGCCGATCTCCGTGATCTTCACCGCACCCGAGCAGCAGCTGCCCGCGATTGCGGCTGCGATGAAGCGCGGTCCGCTCAAGGTCATCGCCTATACGACGGATGGGCGGAAACGGCTTTCCGAAGGCGTGCTTGCGCTCATGAACAATCAGGTCGATTCCACCAGCGGAACCATCCGGCTGAAAGCGACATTCGACAACAAGGACCACGTGCTGTGGCCGGGCTTGTCTGTCTCCACGCGTCTTCTGATTGAGACGGTCAAGGATGCCACTGTCGTGCCCGAAGATGCCGTGCAGCACGGTCCGAACGGGTTGTTCGCCTTCGCGGTCGGCGAGGGCGACAAGGCCGTGGTGCGGCCGCTCAAGGTCCGGGAAACCGGCAATGGCAAAAGCCTGATTGATAGCGGACTGTCGCCCGGCGACCGGGTGGTGACGCGCGGCCAATACCGGGTTCAGGAAGGATCGCTGCTGGCCATGAAGGTTGCGGGCTCCGGCGATAGCGAACCAAGAGCTGATTGA
PROTEIN sequence
Length: 383
MTKSGRPRWGFLLIVLVAAGAAAAVWYGGSSRKPKVGPPPAVPVTIAPVEKADFPVYLSGLGTVQGFNTVQVRTRVDGEITQIVFREGQFVKEGDLLAQIDPRPFQATLDAAKAKKVQDEANLNNAKLDLARSTKLGEFATRQTVDTQSANVLQLSAQILGDQAAIDNAQTQLDYTSIRAPIAGVTGIRMVDVGNIVTAAAQTAIVSIAQVEPISVIFTAPEQQLPAIAAAMKRGPLKVIAYTTDGRKRLSEGVLALMNNQVDSTSGTIRLKATFDNKDHVLWPGLSVSTRLLIETVKDATVVPEDAVQHGPNGLFAFAVGEGDKAVVRPLKVRETGNGKSLIDSGLSPGDRVVTRGQYRVQEGSLLAMKVAGSGDSEPRAD*