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SCNpilot_solid_2_scaffold_312_39

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 33144..34220

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 343.0
  • Bit_score: 636
  • Evalue 1.80e-179
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 366.0
  • Bit_score: 572
  • Evalue 7.00e-161
  • rbh
Pseudouridine synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLS4_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 343.0
  • Bit_score: 636
  • Evalue 1.30e-179
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCGGCCTGTTCAGGCGTCAGTTCGGCAGCTACATGTTCGGTCATGCAAGAGTCTTCTTCAAATCACCAGGATGCGGAAAGTACCGGCGAACGCCGCATTATCACAGCCGGCGCCGCGGGCAAATCGCAGCGGCTCGACCGCGTGCTCGCCGAACAATTCGAGGACCTTTCACGCACCCGGTTGAAGGTTCTGATCGTGGCCGGGCATGTCAGCATCGGTGGAGCGCCGGTCCAGGACCCCGCCTATCAGGTCAGGGCGGGCGAGGTGATCATTGTTGAGGTTCCAGCCGCCGTCCCGGCCGAACCGGAAGGCGAAAGCATCCCGCTCGATATTGTCTATGAGGACGACGATCTCCTCGTGCTCAACAAGCCGAAGGGGCTGGTGGTGCATCCGGCGGCGGGGCATGAGACCGGCACGCTGGTAAATGCCCTTATCGCCCATTGCGGCGCAAGCCTTTCCGGCATCGGCGGCGTCAAGCGCCCCGGCATCGTGCACCGGCTGGACAAGGACACCACCGGGCTGATGGTGGTCGCCAAGAACGATCGCGCCCATCAATCGCTCACAACGCAGTTCGCCGACCATGGCCGGACCGGCGCGCTCCGGCGGGGCTACATGGCGTTCGTCTGGGGAGCACCGTCACGGTTACACGGAACCATCGATCAGCCAATCGACCGTCATCCCTTCGCACGGGAGAAAATGGCGGTGCGGCAAGGCGGACGACACGCCGTCACCCACTGGGAGATGCTTGAGAGCTACGCAGGGCGGGACGGCAAGCCGCTCGCCGCCCTGCTGGCCTGCCAGCTCGAAACCGGACGAACCCATCAGATCCGTGTCCATCTTGGTTATGCCGGGCACCCGCTGATCGGCGACGATGTCTATGGCTCGGGCTTCCGTACCAAGGCCAACCATTTGAGCGGCCCTGCCAAAACGGTCGTGGCGGCTCTGGGCAGACAGGCTCTCCATGCCTATTTCCTCCAGATCGAACACCCGGTCACAGGAGAAATAATGGGCTGGCAGTCAGGGTTGCCGGAGGATCTGGTGCTCCTGCAGGATGCGCTGCGCGCGGCGCCTTGA
PROTEIN sequence
Length: 359
MAACSGVSSAATCSVMQESSSNHQDAESTGERRIITAGAAGKSQRLDRVLAEQFEDLSRTRLKVLIVAGHVSIGGAPVQDPAYQVRAGEVIIVEVPAAVPAEPEGESIPLDIVYEDDDLLVLNKPKGLVVHPAAGHETGTLVNALIAHCGASLSGIGGVKRPGIVHRLDKDTTGLMVVAKNDRAHQSLTTQFADHGRTGALRRGYMAFVWGAPSRLHGTIDQPIDRHPFAREKMAVRQGGRHAVTHWEMLESYAGRDGKPLAALLACQLETGRTHQIRVHLGYAGHPLIGDDVYGSGFRTKANHLSGPAKTVVAALGRQALHAYFLQIEHPVTGEIMGWQSGLPEDLVLLQDALRAAP*