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SCNpilot_solid_2_scaffold_312_40

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 34443..35342

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Afipia felis ATCC 53690 PF9_AFIFE">RepID=K8NPF9_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 299.0
  • Bit_score: 583
  • Evalue 1.40e-163
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 299.0
  • Bit_score: 583
  • Evalue 1.90e-163
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 299.0
  • Bit_score: 580
  • Evalue 2.80e-163
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGCCCGTACAGCCACCTTGCCGATTCTCAACGGAGAATCTGGCCTTTCCCATTACCTCGCCGAAATCCGCAAATTCCCGATGCTCGAGCCGCAGGAGGAATACATGCTCGCCAAGCGTTGGCGCGAGCATGACGACCGGGATGCGGCGCATAAGCTTGTGACCAGCCATTTGCGGCTCGTGGCGAAGATCGCCATGGGCTATCGCGGCTACGGCCTGCCGATCTCCGAGGTCGTCTCGGAAGGCAATGTCGGCCTGATGCAGGCGGTGAAGCGCTTTGAGCCTGAAAAGGGATTCCGTCTCGCCACCTACGCGATGTGGTGGATCAAAGCATCGATCCAGGAATACATCCTGCGCTCGTGGTCGCTCGTGAAAATGGGCACCACCGCGAACCAGAAGAAGCTGTTCTTCAACCTGCGCAAGGCCAAGAGCAAGATCTCGGCGCTGGAAGACGGCGATATGCGCGAGGATCAGGTCAAGCTGATCGCCAAGCGTCTCGGCGTCACCGAGCGCGACGTGATCGACATGAACCGCCGTCTCGGTGGTGACGCCTCGCTCAACGCGCCGATCCGCGACGACGGTGAACCCGGCGAATGGCAGGACTGGCTGGTCGATACCTCGCCCAACCAGGAAGCCATCATGGCGGAGAGCGAGGAATACGACCATCGCCGCCGCGCGTTGACCGGCGCAATGGGCGTACTCAACCCGCGCGAACGCCGCATCTTCGAGGCGCGGCGCCTGGCCGAGGATCCAATAACGCTCGAGGATCTTGCGGCCGAGTTCGGCGTCTCGCGCGAGCGCGTCCGCCAGATCGAGGTGCGCGCCTTCGAGAAGGTACAGGCTGCGGTGAAGAACACCGTGGCGCGCCAGGAGCAGGCAGCTCTCGAAGCTGCCTACTGA
PROTEIN sequence
Length: 300
MARTATLPILNGESGLSHYLAEIRKFPMLEPQEEYMLAKRWREHDDRDAAHKLVTSHLRLVAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALEDGDMREDQVKLIAKRLGVTERDVIDMNRRLGGDASLNAPIRDDGEPGEWQDWLVDTSPNQEAIMAESEEYDHRRRALTGAMGVLNPRERRIFEARRLAEDPITLEDLAAEFGVSRERVRQIEVRAFEKVQAAVKNTVARQEQAALEAAY*