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cn_combo_scaffold_2062

Alias: ERY14_26

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2062_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..254
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E9131C
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KEO98559.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Er
hypothetical protein
cn_combo_scaffold_2062_2
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315..1913
DNA (1599bp) protein (533aa)
Protein translocase subunit SecD n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBY0_ERYLH
secD; preprotein translocase subunit SecD
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2062_3
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1928..2908
DNA (981bp) protein (327aa)
Protein-export membrane protein SecF n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9F8_9SPHN
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" sour
preprotein translocase subunit
cn_combo_scaffold_2062_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2913..4112)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003159C0A
glycoside hydrolase family protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_5
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4109..4696)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000304BF04
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2062_6
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4801..5277
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DEF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC62815.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_2062_7
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5353..7197)
DNA (1845bp) protein (615aa)
elongation factor 3 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E48D29
ABC transporter
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2062_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7306..8058
DNA (753bp) protein (251aa)
Putative outer membrane protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9E7_9SPHN
outer membrane protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2062_9
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8123..8455
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9E8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ29627.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_2062_10
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8584..9261
DNA (678bp) protein (226aa)
Two-component response regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBX0_ERYLH
two-component response regulator
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_11
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9323..10726
DNA (1404bp) protein (468aa)
histidine kinase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000365CD41
two-component signal transduction histidine kinase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_12
unknown

Not on your lists

10808..11206
DNA (399bp) protein (133aa)

This feature has no annotations

cn_combo_scaffold_2062_13
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11207..11515)
DNA (309bp) protein (103aa)
chorismate mutase (EC:5.4.99.5)
chorismate mutase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EF9764
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_14
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..12593
DNA (1011bp) protein (337aa)
farnesyltranstransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003048AE1
Farnesyltranstransferase {ECO:0000313|EMBL:KEO88429.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacte
geranylgeranyl pyrophosphate synthase
cn_combo_scaffold_2062_15
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12678..15125
DNA (2448bp) protein (816aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030D5F92
ATP-dependent helicase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2062_16
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15141..15419
DNA (279bp) protein (93aa)
NADH-ubiquinone oxidoreductase-related protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBW4_ERYLH
NADH-ubiquinone oxidoreductase-related protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_17
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15929..17620
DNA (1692bp) protein (564aa)
DNA polymerase III subunit gamma/tau n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003725F03
DNA polymerase III subunit gamma/tau
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2062_18
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17634..17975
DNA (342bp) protein (114aa)
DNA-binding protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DE88E0
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_19
unknown

Not on your lists

18036..18452
DNA (417bp) protein (139aa)

This feature has no annotations

cn_combo_scaffold_2062_20
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18557..20965
DNA (2409bp) protein (803aa)
peptidase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003788916
ATP-dependent Lon protease
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_21
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21324..21596
DNA (273bp) protein (91aa)
Histone-like protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBW0_ERYLH
histone-like protein
Histone-like protein {ECO:0000313|EMBL:EDL47910.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp
cn_combo_scaffold_2062_22
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21827..22714)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DBFF0D
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2062_23
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22819..23613)
DNA (795bp) protein (265aa)
rRNA methylase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDZ8_9SPHN
Pseudouridine synthase {ECO:0000313|EMBL:KEO88439.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
rRNA methylase rbh
cn_combo_scaffold_2062_trna_1
unknown

Not on your lists

23776..23858
DNA (83bp)
transferRNA
cn_combo_scaffold_2062_24
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24255..24947
DNA (693bp) protein (231aa)
Integrase family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3N3_9SPHN
Integrase family protein {ECO:0000313|EMBL:EGD60847.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
integrase family protein
cn_combo_scaffold_2062_25
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25005..25655
DNA (651bp) protein (217aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V7S7_SPHWW
NADH:flavin oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:KKC26021.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
cn_combo_scaffold_2062_26
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25537..26172)
DNA (636bp) protein (212aa)
Fusion protein of IS3-family transposase and associated protein n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R0W7_9RHOB
Transposase {ECO:0000313|EMBL:KGJ02294.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
fusion protein of IS3-family transposase and associated protein
Displaying 27 items

View Taxonomy