ggKbase home page

cn_combo_scaffold_2639

Alias: ERY14_37

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2639_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173..1747
DNA (1575bp) protein (525aa)
type I restriction endonuclease n=1 Tax=Meganema perideroedes RepID=UPI00035F11E3
type I restriction-modification system, M subunit
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_2639_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1744..2940
DNA (1197bp) protein (399aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:ESV32786.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ESV32786.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteria
Type I restriction-modification system, specificity subunit S n=1 Tax=Bifidobacterium longum E18 RepID=V6XWD6_BIFLN
type I restriction-modification system specificity determinant
cn_combo_scaffold_2639_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2937..5960
DNA (3024bp) protein (1008aa)
DEAD/DEAH box helicase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003697AA7
HsdR family type I site-specific deoxyribonuclease
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_2639_trna_1
unknown

Not on your lists

comp(6540..6612)
DNA (73bp)
transferRNA
cn_combo_scaffold_2639_4
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6743..7552
DNA (810bp) protein (270aa)
leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EF382D
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2639_5
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7408..7998)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ07_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2639_6
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8008..8439)
DNA (432bp) protein (144aa)
NADH dehydrogenase (EC:1.6.99.3)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003667802
Uncharacterized protein {ECO:0000313|EMBL:ABC64318.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_2639_7
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..8990)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00035EAC60
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2639_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8984..9712)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGK3_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2639_9
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9856..11589
DNA (1734bp) protein (578aa)
acyl-CoA synthetase (EC:2.3.1.86)
acyl-CoA synthetase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030E15F6
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2639_10
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11811..13364)
DNA (1554bp) protein (518aa)
Membrane protein, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGK1_9SPHN
Membrane protein {ECO:0000313|EMBL:KEO85374.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL
hypothetical protein
cn_combo_scaffold_2639_11
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13585..14817
DNA (1233bp) protein (411aa)
toxic anion resistance protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F509EB
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2639_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14831..15637
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGK5_9SPHN
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2639_13
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15642..15941
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031568FC
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2639_14
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16132..16722
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000318E43D
Uncharacterized protein {ECO:0000313|EMBL:EAQ28961.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_2639_15
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16719..19283
DNA (2565bp) protein (855aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E3A855
Histidine kinase {ECO:0000313|EMBL:KEO85379.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL
response regulator receiver modulated GAF sensor protein
cn_combo_scaffold_2639_16
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19536..20267)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E5EEBC
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2639_17
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20386..21174
DNA (789bp) protein (263aa)
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying 18 items

View Taxonomy