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cn_combo_scaffold_4105

Alias: ERY14_57

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4105_1
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1..333)
DNA (333bp) protein (111aa)
30S ribosomal protein S1 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031688DB
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobac
rpsA; 30S ribosomal protein S1
cn_combo_scaffold_4105_2
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(564..1190)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000313914A
cytidylate kinase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_4105_3
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1187..1702)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C3X0_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KJS27522.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c
hypothetical protein
cn_combo_scaffold_4105_4
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1778..3106)
DNA (1329bp) protein (443aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9Q1_ERYLH
3-phosphoshikimate 1-carboxyvinyltransferase rbh
cn_combo_scaffold_4105_5
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3327..3656
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F6A7CF
Uncharacterized protein {ECO:0000313|EMBL:KEO92573.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_4105_trna_1
unknown

Not on your lists

3746..3818
DNA (73bp)
transferRNA
cn_combo_scaffold_4105_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3979..5436
DNA (1458bp) protein (486aa)
signal recognition particle n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DA69D0
signal recognition particle GTPase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_7
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5479..5928
DNA (450bp) protein (150aa)
30S ribosomal protein S16 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000301677B
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythro
30S ribosomal protein S16
cn_combo_scaffold_4105_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5937..6437
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E6EC17
16S rRNA processing protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_9
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6442..7185
DNA (744bp) protein (248aa)
tRNA (guanine-N1)-methyltransferase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD077D
tRNA (guanine-N1)-methyltransferase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_4105_10
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7182..7550
DNA (369bp) protein (123aa)
50S ribosomal protein L19 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBH7_9SPHN
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Ery
rplS; 50S ribosomal protein L19
cn_combo_scaffold_4105_11
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7816..9978
DNA (2163bp) protein (721aa)
peptidase S9 n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD077B
dipeptidyl aminopeptidase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10054..11079
DNA (1026bp) protein (342aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000364529F
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_13
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11086..11652
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DE808F
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_14
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11663..12412
DNA (750bp) protein (250aa)
Hydrolase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBJ1_9SPHN
hydrolase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_15
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12479..14305
DNA (1827bp) protein (609aa)
Zinc-dependent metallopeptidase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBI9_9SPHN
zinc-dependent metallopeptidase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_4105_16
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14299..15276
DNA (978bp) protein (326aa)
Putative surface layer protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBI8_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_4105_17
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15273..15710
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DD5A60
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_18
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15757..16662
DNA (906bp) protein (302aa)
ribosomal protein S6 modification protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003687608
ribosomal protein S6 modification protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_4105_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16659..17417)
DNA (759bp) protein (253aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6C6_9SPHN
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ENY83082.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
3-oxoacyl-ACP reductase
cn_combo_scaffold_4105_20
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17414..18850)
DNA (1437bp) protein (479aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacterace
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBK0_9SPHN
cn_combo_scaffold_4105_21
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18982..19587)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003127A6F
rplI; 50S ribosomal protein L9
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_22
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19602..19826)
DNA (225bp) protein (75aa)
30S ribosomal protein S18 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F319C0
30S ribosomal protein S18
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_23
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19826..20191)
DNA (366bp) protein (122aa)
30S ribosomal protein S6 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F5E36E
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob
rpsF; 30S ribosomal protein S6
cn_combo_scaffold_4105_24
unknown

Not on your lists

comp(20149..20364)
DNA (216bp) protein (72aa)

This feature has no annotations

cn_combo_scaffold_4105_25
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20392..21339
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000304B9E4
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_4105_26
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21329..21997
DNA (669bp) protein (223aa)
glutathione S-transferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000314A34C
glutathione S-transferase rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_4105_27
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21994..23520)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EB82CA
Uncharacterized protein {ECO:0000313|EMBL:KEO87416.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
AMP-dependent synthetase and ligase
cn_combo_scaffold_4105_28
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23557..23853)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FDC1A1
Uncharacterized protein {ECO:0000313|EMBL:KEO92543.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_4105_29
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23850..25277)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000318D07C
UDP-N-acetylmuramate--alanine ligase
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying items 1-30 of 32 in total

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