ggKbase home page

cn_combo_scaffold_6224

Alias: ERY14_79

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6224_1
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F535B7
gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_6224_2
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(397..699)
DNA (303bp) protein (101aa)
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
asparaginyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F9F250
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_6224_3
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(716..1282)
DNA (567bp) protein (189aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAD7_9SPHN
peptidyl-prolyl isomerase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_6224_4
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1487..1693)
DNA (207bp) protein (69aa)
30S ribosomal protein S21 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HAY1_9SPHN
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
rpsU; 30S ribosomal protein S21
cn_combo_scaffold_6224_5
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1939..2364
DNA (426bp) protein (142aa)
Putative fluoride ion transporter CrcB n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAD5_9SPHN
camphor resistance protein CrcB
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_6224_6
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2361..3590
DNA (1230bp) protein (410aa)
pseudouridine synthase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FA1914
pseudouridylate synthase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_6224_7
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3590..4189
DNA (600bp) protein (200aa)
negative transcriptional regulator n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD1160
Negative transcriptional regulator {ECO:0000313|EMBL:KEO93335.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Ery
negative transcriptional regulator
cn_combo_scaffold_6224_8
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4186..4866
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003647E56
Haloacid dehalogenase {ECO:0000313|EMBL:KEO88061.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter s
HAD family hydrolase
cn_combo_scaffold_6224_9
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4863..5093
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
cn_combo_scaffold_6224_10
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5090..5797
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F2B809
ATP12 ATPase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_6224_11
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5943..6587)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAF2_9SPHN
ABC transporter {ECO:0000313|EMBL:KEO88058.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL4
hypothetical protein
cn_combo_scaffold_6224_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6602..7549)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DDCB13
ABC transporter periplasmic protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_6224_13
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7594..8418)
DNA (825bp) protein (275aa)
ABC transporter, ATP-binding protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAF0_9SPHN
ABC transporter ATP-binding protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_6224_14
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8424..9536)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037D82FD
ABC transporter permease {ECO:0000313|EMBL:KEO88055.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacte
ABC transporter permease
Displaying 14 items

View Taxonomy