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cn_combo_scaffold_2888

Alias: ERY14_125

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2888_1
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10..1683)
DNA (1674bp) protein (558aa)
ABC transporter ATP-binding protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FF482E
ABC transporter ATP-binding protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2888_2
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1809..3230
DNA (1422bp) protein (474aa)
Peptidase, M28 family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDR2_9SPHN
peptidase, M28 family protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2888_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3243..3602
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U035_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KEO99095.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_2888_4
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3654..4535
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0003189E2B
LysR family transcriptional regulator {ECO:0000313|EMBL:ESZ86857.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="B
LysR family transcriptional regulator
cn_combo_scaffold_2888_5
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4649..6199
DNA (1551bp) protein (517aa)
NADH dehydrogenase (quinone); K05577 NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002DD8E68
NADH dehydrogenase (quinone)
cn_combo_scaffold_2888_6
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6230..8539
DNA (2310bp) protein (770aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00030BF761
hypothetical protein; K09822 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
cn_combo_scaffold_2888_7
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..8636
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00030BF761
hypothetical protein
UPF0753 protein RD1_4144 {ECO:0000255|HAMAP-Rule:MF_01871}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter d
cn_combo_scaffold_2888_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9110..10216)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DEL8_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU77327.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
membrane protein
cn_combo_scaffold_2888_9
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10216..11367)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CZA2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EXS71179.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
cn_combo_scaffold_2888_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11364..12365)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G2Z1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98040.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hemolysin secretion protein D
cn_combo_scaffold_2888_11
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12362..13723)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HF62_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98039.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
cn_combo_scaffold_2888_12
unknown

Not on your lists

comp(14103..14312)
DNA (210bp) protein (70aa)

This feature has no annotations

cn_combo_scaffold_2888_13
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14431..15480)
DNA (1050bp) protein (350aa)
Putative photosynthesis gene regulator, AppA/PpaA family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CP9_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KEO99096.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
AppA/PpaA family photosynthesis gene regulator
cn_combo_scaffold_2888_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15813..16172
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family, ArsR1 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIM2_9SPHN
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
transcriptional regulator
cn_combo_scaffold_2888_15
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16172..16678
DNA (507bp) protein (169aa)
UPI0003D02438 related cluster n=1 Tax=unknown RepID=UPI0003D02438
Arsenate reductase {ECO:0000313|EMBL:ESZ86839.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACI
protein tyrosine phosphatase
cn_combo_scaffold_2888_16
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16678..17760
DNA (1083bp) protein (361aa)
Bile acid:sodium symporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEW5_9SPHN
bile acid:sodium symporter
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2888_17
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17866..19404
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIW4_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EXS67931.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
cn_combo_scaffold_2888_trna_2
unknown

Not on your lists

comp(19541..19614)
DNA (74bp)
transferRNA
cn_combo_scaffold_2888_trna_1
unknown

Not on your lists

comp(19642..19714)
DNA (73bp)
transferRNA
cn_combo_scaffold_2888_18
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19811..20830)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F30496
WalW protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2888_19
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20865..22760)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DAEC6C
Uncharacterized protein {ECO:0000313|EMBL:KEO88400.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
two-component signal transduction histidine kinase
cn_combo_scaffold_2888_20
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23034..23495
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EFF491
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2888_21
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23926..25236)
DNA (1311bp) protein (437aa)
ndh; NADH dehydrogenase (EC:1.6.99.3)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DE906F
NADH dehydrogenase {ECO:0000313|EMBL:KEO98550.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litor
cn_combo_scaffold_2888_22
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25492..26841)
DNA (1350bp) protein (450aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KEO88404.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KEO88404.1};; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacterace
biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.3.4.14)
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E625BF
cn_combo_scaffold_2888_23
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26845..27342)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E8E093
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KEO88405.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
acetyl-CoA carboxylase biotin carboxyl carrier protein
cn_combo_scaffold_2888_24
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27440..27880)
DNA (441bp) protein (147aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9G6_9SPHN
Displaying 26 items

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