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cn_combo_scaffold_4796

Alias: ERY14_137

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4796_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1741)
DNA (1740bp) protein (580aa)
Membrane protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HB63_9SPHN
Membrane protein {ECO:0000313|EMBL:EQB09348.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.
hypothetical protein rbh
cn_combo_scaffold_4796_2
unknown

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comp(1767..2045)
DNA (279bp) protein (93aa)

This feature has no annotations

cn_combo_scaffold_4796_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2042..2773)
DNA (732bp) protein (244aa)
Tetratricopeptide TPR_4 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDP3_9SPHN
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:CCA90418.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
cn_combo_scaffold_4796_4
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2773..3666)
DNA (894bp) protein (298aa)
Flp pilus assembly protein TadC n=1 Tax=Sphingobium indicum B90A RepID=I5BFJ3_9SPHN
Flp pilus assembly protein TadC {ECO:0000313|EMBL:EIM68345.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
tadC; Flp pilus assembly protein TadC rbh
cn_combo_scaffold_4796_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3666..4568)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IEX5_9SPHN
Type II secretion system F domain protein {ECO:0000313|EMBL:EZP74320.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
tadB; Flp pilus assembly protein TadB
cn_combo_scaffold_4796_6
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4565..5980)
DNA (1416bp) protein (472aa)
TadA ATPase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IKP5_9SPHN
Pilus assembly protein CpaF {ECO:0000313|EMBL:AJR26963.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
cpaF; pilus assembly protein CpaF rbh
cn_combo_scaffold_4796_7
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5977..7146)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HDN6_9SPHN
Response regulator receiver protein {ECO:0000313|EMBL:KFG90980.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
cpaE; pilus assembly protein CpaE rbh
cn_combo_scaffold_4796_8
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7146..7412)
DNA (267bp) protein (89aa)
Type II and III secretion system protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F314_SPHCR
type II and III secretion system protein
Pilus assembly protein CpaC {ECO:0000313|EMBL:AJR23694.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
cn_combo_scaffold_4796_9
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7409..8320)
DNA (912bp) protein (304aa)
Flp pilus assembly protein secretin CpaC n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039B0521
Pilus assembly protein CpaC {ECO:0000313|EMBL:AJR23694.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
cpaC; Flp pilus assembly protein secretin CpaC rbh
cn_combo_scaffold_4796_10
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8317..9213)
DNA (897bp) protein (299aa)
Flp pilus assembly protein CpaB n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F315_SPHCR
Pilus assembly protein CpaB {ECO:0000313|EMBL:AJR26960.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
Flp pilus assembly protein CpaB
cn_combo_scaffold_4796_11
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9621..10784
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HCM1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB09863.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
cn_combo_scaffold_4796_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10973..12199)
DNA (1227bp) protein (409aa)
Diguanylate phosphodiesterase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDN1_9SPHN
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EZP74328.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
cn_combo_scaffold_4796_13
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12316..13719)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P0P7_9SPHN
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:EZP79672.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
triple helix repeat-containing collagen
Displaying 13 items

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