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cn_combo_scaffold_525_16

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 8909..9964

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 351.0
  • Bit_score: 665
  • Evalue 3.50e-188
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 351.0
  • Bit_score: 636
  • Evalue 5.90e-180
DNA-directed RNA polymerase subunit alpha n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E74BB6 similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 351.0
  • Bit_score: 669
  • Evalue 1.70e-189

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Taxonomy

Erythrobacter sp. JL475 → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGTCCGTCAACACGAAGAACTGGCAGGAACTGAAGAAACCCAACACCCTCGAAATCAAGGACGGCGGCGATCGTCAGCGCAAGGCAACTTTCGTTGCTGAACCGCTGGAGCGTGGCTTTGGTCTCACGCTCGGCAACGCGCTGCGCCGGGTGCTGCTCTCCAGCCTGCAAGGGGCGGCGATCACCTCGATCAAGATCGAGAACGTGCTTCACGAATTCTCGTCGCTCGCGGGCGTCCGCGAAGACGTTACCGACATCGTTCTGAATGTGAAGCAGATCGCTCTCAAGATGGAAGGCGAAGGCCCCAAGCGGCTTCAGCTTTCCGCCACTGGCCCCGGCGAAGTGCGCGCAGGCGACATCGCAGTGACTGGTGACATCGAGGTGATGAACAAGGATCTGGTGATCTGCAACCTCGACGAGGGCGCGACGCTCAACATGGAGCTGACGGCCGATACCGGCAAGGGCTATTCGCCTGCTGTGCAGAACCGCCCGGTTGATGCTCCGATTGGCCTTATCCCGGTCGACTCGCTTTATTCGCCGGTCCGTCAGGTGAGCTACAAGGTCGAGAACGCCCGCGTGGGTCAGGAGCTCGATTACGACAAGCTCAGCCTCACGGTGGAAACCGATGGCACCGTGACGCCTGAGGACGCAGTAGCCTATGCTGCGCGCATCCTGCAGGACCAGCTGTCGCTGTTCGTCCACTTCGAAGATGGCATCCCGCAGCCACAGGGCGCGATGATCGGCCATGCCGCTGCTCCTGAAGAAAGCGACGCCAACCAGCTAAACCGTTACCTTCTCAAGAAGGTTGACGAGCTGGAACTGTCGGTGCGTTCGGCCAACTGCCTCAAGAACGACAATATCATCTACATTGGCGATCTGGTTCAGAAGACCGAAGCCGAGATGCTGCGCACGCCGAACTTTGGCCGCAAGTCGCTCAATGAGATCAAGGAAGTGCTGTCGTCGATGGGTCTGCGCCTTGGCATGGATATCCCTGGCTGGCCGCCGGAGAACATCGAGGAAATGGCCAAGAAGCTTGAGCAGGAGCTTTTGGGCTAA
PROTEIN sequence
Length: 352
MSVNTKNWQELKKPNTLEIKDGGDRQRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPGEVRAGDIAVTGDIEVMNKDLVICNLDEGATLNMELTADTGKGYSPAVQNRPVDAPIGLIPVDSLYSPVRQVSYKVENARVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLSLFVHFEDGIPQPQGAMIGHAAAPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG*