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cn_combo_scaffold_525

Alias: ERY14_1

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_525_1
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


120..488
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6X3_9SPHN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; E
rplN; 50S ribosomal protein L14
cn_combo_scaffold_525_2
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


488..808
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WB41_9SPHN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythro
rplX; 50S ribosomal protein L24
cn_combo_scaffold_525_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


801..1388
DNA (588bp) protein (196aa)
50S ribosomal protein L5 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FCEDDB
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythroba
50S ribosomal protein L5
cn_combo_scaffold_525_4
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1431..1736
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=RS14_ERYLH
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000255|HAMAP-Rule:MF_00537}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythro
cn_combo_scaffold_525_5
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1747..2142
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DCEBFE
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob
rpsH; 30S ribosomal protein S8
cn_combo_scaffold_525_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2142..2675
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0C7_9SPHN
50S ribosomal protein L6
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_7
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2677..3021
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000380CACB
rplR; 50S ribosomal protein L18
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3021..3758
DNA (738bp) protein (246aa)
30S ribosomal protein S5 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WB44_9SPHN
rpsE; 30S ribosomal protein S5
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_9
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3766..3942
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FF66C3
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; E
rpmD; 50S ribosomal protein L30
cn_combo_scaffold_525_10
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4081..4614
DNA (534bp) protein (178aa)
50S ribosomal protein L15 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DABE80
rplO; 50S ribosomal protein L15
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_11
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4803..6167
DNA (1365bp) protein (455aa)
Protein translocase subunit SecY n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WB50_9SPHN
secY; preprotein translocase subunit SecY
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_525_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6316..6912
DNA (597bp) protein (199aa)
adenylate kinase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003010B70
adk; adenylate kinase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_13
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6952..7638
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WB48_9SPHN
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_14
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7961..8329
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D6A7AF
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythro
rpsM; 30S ribosomal protein S13
cn_combo_scaffold_525_15
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8390..8779
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003004474
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob
30S ribosomal protein S11
cn_combo_scaffold_525_16
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8909..9964
DNA (1056bp) protein (352aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E74BB6
cn_combo_scaffold_525_17
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10114..10533
DNA (420bp) protein (140aa)
50S ribosomal protein L17 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000300161B
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
rplQ; 50S ribosomal protein L17
cn_combo_scaffold_525_18
unknown

Not on your lists

comp(10803..11279)
DNA (477bp) protein (159aa)

This feature has no annotations

cn_combo_scaffold_525_19
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11389..12336
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037478CC
Uncharacterized protein {ECO:0000313|EMBL:KEO92659.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_525_20
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12333..12980)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030EC24D
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_525_21
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12977..13675)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000360ABB3
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_22
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13701..15059)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030F2EE4
amidase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_525_23
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15131..16636)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7839A
Uncharacterized protein {ECO:0000313|EMBL:KGB56612.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_525_24
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16647..18050)
DNA (1404bp) protein (468aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythro
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031AC974
cn_combo_scaffold_525_25
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18150..19391)
DNA (1242bp) protein (414aa)
dihydrolipoamide succinyltransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F792F6
dihydrolipoamide succinyl transferase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_525_26
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19419..22232)
DNA (2814bp) protein (938aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
MFS transporter n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031B4720
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_525_27
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22301..23191)
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WB77_9SPHN
succinyl-CoA synthetase subunit alpha
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_525_28
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23279..23740)
DNA (462bp) protein (154aa)
UPI0003D0604E related cluster n=1 Tax=unknown RepID=UPI0003D0604E
malate dehydrogenase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_525_29
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23737..24210)
DNA (474bp) protein (158aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=383381 species="Bacteria; Pr
Malate dehydrogenase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P706_9SPHN
malate dehydrogenase
cn_combo_scaffold_525_30
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24531..24863)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000360BAA7
Uncharacterized protein {ECO:0000313|EMBL:KEO87522.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
Displaying items 1-30 of 118 in total

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