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cn_combo_scaffold_2078_5

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3192..3722

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EAQ29168.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EAQ29168.1};; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrob similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 174.0
  • Bit_score: 299
  • Evalue 3.30e-78
RNA polymerase sigma factor n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000366508B similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 176.0
  • Bit_score: 310
  • Evalue 1.30e-81
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 171.0
  • Bit_score: 243
  • Evalue 5.60e-62

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Taxonomy

Erythrobacter sp. NAP1 → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGCTGCGACTGGCTGATGGCGACAAGACCGCGCTCGAGGAAATTTACCACGCAACACGGGTGAAGCTGTTTGGCATATGCCTGCGTATCTTGGGCGACCGAAAGGAAGCCGAGGACGCCTTGCAGGACGTTTACATCAACCTCTGGCAGCGGGCGGACCGCTATGACCCAGCGCGCGCCAGCCCGATCGCGTGGCTGGCGGCCTTTGCGCGCAACCGCGCGATTGATCGGTTGCGCACGGGCAAGGTTCGCGGCGGTGCGGTGCCGGTTGAGGAAGCCGCCCCGCTCGCTGATGAAGCGCCGCTGGCCGAGGCTTTGCTTATTGATCTGGAACGAAACGCGCAGATTCACACCTGCCTGGGCGCGCTGGACGAGCGCACGCAAATCCACATCCGCGCGGCATTTTTCGAAGGCAAAACCTATGCACAGCTTGCCGATCAGGCAGGTGTCCCGCTAGGAACCATGAAGAGCTGGATCCGGCGCGGGCTGCTTCGGCTGCGCGCCTGCCTCGAAGCGAGCGAGCGGGCATGA
PROTEIN sequence
Length: 177
MLRLADGDKTALEEIYHATRVKLFGICLRILGDRKEAEDALQDVYINLWQRADRYDPARASPIAWLAAFARNRAIDRLRTGKVRGGAVPVEEAAPLADEAPLAEALLIDLERNAQIHTCLGALDERTQIHIRAAFFEGKTYAQLADQAGVPLGTMKSWIRRGLLRLRACLEASERA*