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cn_combo_scaffold_2078

Alias: ERY14_27

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2078_1
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E2F91E
Peptidase {ECO:0000313|EMBL:KEO88036.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
metal-dependent protease
cn_combo_scaffold_2078_2
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

294..1247
DNA (954bp) protein (318aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobact
Pseudouridine synthase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9M3_9SPHN
pseudouridine synthase D large subunit
cn_combo_scaffold_2078_3
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1364..2269
DNA (906bp) protein (302aa)
RNA polymerase sigma 70 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003002822
RNA polymerase factor sigma-32
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_4
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2385..3053
DNA (669bp) protein (223aa)
peptidoglycan transglycosylase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E9E6D7
monofunctional biosynthetic peptidoglycan transglycosylase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2078_5
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3192..3722
DNA (531bp) protein (177aa)
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EAQ29168.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EAQ29168.1};; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrob
RNA polymerase sigma factor n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000366508B
RNA polymerase sigma factor
cn_combo_scaffold_2078_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3719..4480
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DD3920
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_7
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4669..5274
DNA (606bp) protein (202aa)
Beta-Ig-H3/fasciclin n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QGV3_BRESC
beta-Ig-H3/fasciclin
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:ADL00919.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="
cn_combo_scaffold_2078_8
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5467..5742)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO90281.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l
cn_combo_scaffold_2078_9
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..7092)
DNA (1266bp) protein (422aa)
ATP-dependent protease n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003667D40
clpX; ATP-dependent protease ATP-binding subunit ClpX
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_10
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7289..7990)
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030BEAB7
clpP; ATP-dependent Clp protease proteolytic subunit
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_11
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8150..9658
DNA (1509bp) protein (503aa)
Amidase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAL0_9SPHN
amidase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9698..11254)
DNA (1557bp) protein (519aa)
trigger factor n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E273A9
tig; trigger factor
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_trna_2
unknown

Not on your lists

comp(11325..11406)
DNA (82bp)
transferRNA
cn_combo_scaffold_2078_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11538..11834
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000365C3F1
Uncharacterized protein {ECO:0000313|EMBL:AKH42487.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
cn_combo_scaffold_2078_14
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11887..13296
DNA (1410bp) protein (470aa)
GTP-binding protein Der n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F1E5D3
engA; GTP-binding protein EngA
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2078_15
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13296..13778
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EBD30B
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2078_16
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..14541
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO93287.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_2078_17
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14781..15263)
DNA (483bp) protein (161aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Ery
bacterioferritin n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD04D9
bacterioferritin
cn_combo_scaffold_2078_18
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15413..15604)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F037DC
ferredoxin
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2078_19
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15836..17140)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003023D85
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_20
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17249..18343)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAG5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ29150.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_2078_21
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18574..19314
DNA (741bp) protein (247aa)
plasmid partitioning protein ParA n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030ED1D7
ParA-like protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_22
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19330..20025
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EEC3DD
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_23
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20046..21686
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDE0_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:KEO93280.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_2078_24
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21734..22963)
DNA (1230bp) protein (410aa)
dihydroorotase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00036CFDD9
dihydroorotase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_25
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22960..24018)
DNA (1059bp) protein (353aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
aspartate carbamoyltransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F94860
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2078_26
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24123..26033
DNA (1911bp) protein (637aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030D6BF1
serine protease
cn_combo_scaffold_2078_trna_1
unknown

Not on your lists

26141..26212
DNA (72bp)
transferRNA
Displaying 28 items

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