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CN-SCN_Erythrobacter_14x

CN-SCN_Sphingomonadales_62_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.72 Longest contig: 128.95 Kbp Bin length: 2.80 Mbp GC content: 61.96 %
Contigs count: 136 Features count: 2751 rRNAs count: 0 tRNAs count: 36

Genome completeness

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1

Description

Partial 38

Displaying items 1-50 of 136 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_18726 ERY14_105
Species: BJP_IG2102_Porphyrobacter_62_18 (75%)
4 5920 bp 66.20 14.19 86.60
cn_combo_scaffold_2581 ERY14_35
Order: Sphingomonadales (96%)
25 21544 bp 65.76 13.55 96.72
cn_combo_scaffold_12001 ERY14_99
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (60%)
5 5313 bp 65.20 13.80 97.06
cn_combo_scaffold_7646 ERY14_130
Order: Sphingomonadales (90%)
10 8065 bp 64.95 13.19 95.93
cn_combo_scaffold_7209 ERY14_84
Order: Sphingomonadales (100%)
9 8495 bp 64.94 14.13 90.94
cn_combo_scaffold_5707 ERY14_77
Species: BJP_IG2102_Porphyrobacter_62_18 (83.33%)
12 10454 bp 64.72 15.46 89.42
cn_combo_scaffold_2046 ERY14_120
Order: Sphingomonadales (69.23%)
26 30416 bp 64.01 13.99 96.92
cn_combo_scaffold_12227 ERY14_100
Order: Sphingomonadales (100%)
5 5223 bp 63.93 12.46 89.37
cn_combo_scaffold_3125 ERY14_45
Order: Sphingomonadales (94.12%)
17 18213 bp 63.75 12.50 95.96
cn_combo_scaffold_8629 ERY14_91
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
10 8834 bp 63.50 14.39 91.73
cn_combo_scaffold_12836 ERY14_103
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (75%)
4 5003 bp 63.50 11.55 87.49
cn_combo_scaffold_810 ERY14_3
Order: Sphingomonadales (89.09%)
55 56456 bp 63.45 14.53 91.08
cn_combo_scaffold_5020 ERY14_128
Order: Sphingomonadales (87.5%)
8 11726 bp 63.37 14.54 96.27
cn_combo_scaffold_12539 ERY14_102
Order: Sphingomonadales (100%)
14 11974 bp 63.32 13.55 95.08
cn_combo_scaffold_4732 ERY14_66
Order: Sphingomonadales (100%)
12 12410 bp 63.31 14.50 91.43
cn_combo_scaffold_10528 ERY14_95
Order: Sphingomonadales (85.71%)
7 6020 bp 63.29 12.87 97.33
cn_combo_scaffold_2399 ERY14_33
Order: Sphingomonadales (100%)
27 22903 bp 63.18 14.26 92.08
cn_combo_scaffold_10954 ERY14_96
Species: BJP_IG2102_Porphyrobacter_62_18 (60%)
5 5791 bp 63.17 13.14 95.32
cn_combo_scaffold_5074 ERY14_112
Class: Alphaproteobacteria (60%)
10 11612 bp 63.15 13.48 90.84
cn_combo_scaffold_1321 ERY14_11
Order: Sphingomonadales (97.22%)
36 38683 bp 63.12 14.14 90.19
cn_combo_scaffold_1071 ERY14_7
Order: Sphingomonadales (97.73%)
44 45691 bp 63.11 13.67 94.00
cn_combo_scaffold_1664 ERY14_19
Order: Sphingomonadales (92.31%)
26 31670 bp 63.08 14.24 93.30
cn_combo_scaffold_7015 ERY14_82
Order: Sphingomonadales (100%)
3 8721 bp 63.08 13.76 97.01
cn_combo_scaffold_3952 ERY14_55
Order: Sphingomonadales (92.86%)
14 14769 bp 63.02 13.51 93.99
cn_combo_scaffold_2532 ERY14_122
Order: Sphingomonadales (84.21%)
19 21918 bp 62.92 13.82 91.77
cn_combo_scaffold_1211 ERY14_9
Order: Sphingomonadales (100%)
49 41216 bp 62.89 14.26 90.17
cn_combo_scaffold_8386 ERY14_89
Species: Erythrobacter sp. NAP1 (50%)
4 7443 bp 62.89 14.12 91.98
cn_combo_scaffold_5447 ERY14_74
Order: Sphingomonadales (100%)
11 10904 bp 62.86 14.03 97.64
cn_combo_scaffold_6578 ERY14_80
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
14 9222 bp 62.80 13.47 93.07
cn_combo_scaffold_858 ERY14_5
Order: Sphingomonadales (96.55%)
58 54444 bp 62.77 14.05 92.07
cn_combo_scaffold_3467 ERY14_51
Order: Sphingomonadales (88.57%)
35 31976 bp 62.73 14.23 90.88
cn_combo_scaffold_5459 ERY14_75
Order: Sphingomonadales (100%)
12 14539 bp 62.71 12.88 90.85
cn_combo_scaffold_6881 ERY14_114
Species: Erythrobacter litoralis (100%)
15 12866 bp 62.68 12.96 96.72
cn_combo_scaffold_835 ERY14_4
Order: Sphingomonadales (97.62%)
42 55450 bp 62.67 13.28 95.72
cn_combo_scaffold_3177 ERY14_47
Genus: Erythrobacter (52.94%)
17 17951 bp 62.63 13.88 95.73
cn_combo_scaffold_6224 ERY14_79
Order: Sphingomonadales (100%)
14 9682 bp 62.63 13.63 90.42
cn_combo_scaffold_1864 ERY14_118
Order: Sphingomonadales (66.67%)
21 29178 bp 62.63 13.42 93.49
cn_combo_scaffold_4796 ERY14_137
Genus: Sphingobium (53.85%)
13 13719 bp 62.62 12.98 94.80
cn_combo_scaffold_1424 ERY14_13
Order: Sphingomonadales (95.16%)
62 60962 bp 62.61 14.14 89.61
cn_combo_scaffold_8045 ERY14_86
Order: Sphingomonadales (100%)
8 7735 bp 62.61 13.69 91.42
cn_combo_scaffold_7281 ERY14_85
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
12 8417 bp 62.60 13.71 92.49
cn_combo_scaffold_2089 ERY14_28
Order: Sphingomonadales (93.33%)
30 27476 bp 62.58 13.23 93.27
cn_combo_scaffold_4490 ERY14_64
Order: Sphingomonadales (100%)
14 13094 bp 62.56 13.55 92.36
cn_combo_scaffold_16442 ERY14_104
Genus: Erythrobacter (50%)
6 5524 bp 62.55 17.27 92.38
cn_combo_scaffold_4909 ERY14_68
Order: Sphingomonadales (92.31%)
13 11977 bp 62.54 13.89 89.21
cn_combo_scaffold_2626 ERY14_36
Order: Sphingomonadales (93.75%)
16 21259 bp 62.53 12.57 95.37
cn_combo_scaffold_10060 ERY14_116
Species: Erythrobacter litoralis (62.5%)
8 6289 bp 62.47 13.32 93.69
cn_combo_scaffold_4393 ERY14_60
Order: Sphingomonadales (95%)
20 20410 bp 62.47 14.85 89.37
cn_combo_scaffold_2822 ERY14_41
Species: BJP_IG2102_Porphyrobacter_62_18 (60%)
30 32697 bp 62.43 14.52 91.20
cn_combo_scaffold_5247 ERY14_73
Genus: Erythrobacter (69.23%)
13 11251 bp 62.43 14.04 94.42
Displaying items 1-50 of 136 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.